Serratia sp. HRI: GF111_09425
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Entry
GF111_09425 CDS
T10951
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
serh Serratia sp. HRI
Brite
Transcription machinery [BR:
serh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GF111_09425 (rapA)
BRITE hierarchy
Other DBs
NCBI-ProteinID:
UBI66048
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Position
1931737..1934643
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AA seq
968 aa
AA seq
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MPFTLGQRWISDTESELGLGTVVALDTRMITLLFPATGENRLYARNDSPITRVMFNPGDT
VSSHEGWQLQVEEVKEENGLLTYIGTRQDTQESGVAMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQYRLPFAGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIVVPETLQHQWLVEMMRRFNLYFSLFDDSRYAEAKL
DSSNPFETEQLVICSLDFVRRNKQRLEELADAQWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPSRFHDYGDFVAEQQKYRPVADAVTLLL
SGERLADDKLNLLGELIDEQDIEPLLKAANSEGDNAEQARQELVAMLMDRHGTSRVLFRN
TRNGVKGFPHRNLHQIKLPLPTQYQTAIKVSGIMGAKKSVEARARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLDYLLANRNEKVLVICAKADTALQLEQVLREREAIRAAVFHEGLSI
IERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFASQLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQIMVPYLEHTAQAVLGRWFHEGLDAFEHTCPTGRTIYDSCYEQLIGYLAAPTEQ
EGFDEFIHGCRQQHDQLKAQLEQGRDRLLEMHSNGGDKAQALAAAIAEQDNDVNLVGFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDRDRALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELVYVVEAQAPKHLQLTRFLPPTP
IRMLMDRKGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQDVHAMLQQAESLVEAQAR
TLIEQAKQEADDKLSAELARLEALKAVNPNIRDDEVEALEFNRRQVLANLNEAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttactcttggtcaacgctggatcagcgacacggaaagcgaattaggactgggc
accgtcgtggcgctggacacgcgcatgattaccctgcttttccccgccaccggtgaaaac
cgcctctatgccagaaacgattcgccgatcacccgcgtgatgttcaacccgggcgatacc
gtcagcagccacgagggatggcagctgcaggtggaagaggtgaaagaggaaaacggtctg
ttgacctatatcggcacccgccaggacacccaggaaagcggcgtggcgatgcgcgaagtc
ctgctggacagcaagctgaccttcagcaaaccgcaggatcgcctgttcgccggccagatc
gaccgcatggaccgtttcgcgctgcgtttccgcgcacgcaaataccagagcgagcagtat
cgcctgccgttcgccggcctgcgcggcatgcgcgccagcctgatcccgcaccagttgcac
atcgcccatgaagtcggccagcgccatgcgccgcgcgtcttgctagcggacgaagtcggc
ctcggcaaaaccatcgaagccggcatgatcatccaccagcagctgctggcgggccgcgcc
gagcgcgtgctgatcgtggtgccggaaacgctgcagcaccagtggctggtggagatgatg
cgccgcttcaacctctacttctcgctgttcgacgacagccgctacgccgaagccaagctc
gacagcagcaacccgttcgaaaccgaacagctggtgatctgctcgctggacttcgtgcgc
cgcaacaagcagcgcctggaagagctggcggacgcccagtgggatctgctggtggtcgac
gaagcgcaccacctggcctggagcgaagaagcgccgagccgcgaatatcaggtgatcgaa
cagctggccgagcatatccccggcgtgctgctgctgaccgccaccccggagcagctgggc
caacagagccacttcgcgcgcctgcgtctgctcgatccgagccgtttccacgactacggc
gatttcgtcgccgagcagcagaaataccgcccggtggccgacgccgtcaccctgctgctg
agcggtgaacgcctggccgacgacaagctgaacctgctgggcgagctgatcgacgagcag
gacatcgaaccgctgctcaaagcggccaacagcgaaggcgacaacgccgagcaggcgcgc
caggagctggtggccatgctgatggatcgccacggcaccagccgcgtgctgttccgcaac
acccgcaacggcgtgaagggcttcccacaccgcaacctgcaccagatcaagctgccgttg
ccgacccagtatcagaccgcgatcaaagtctccggcatcatgggcgccaagaagtccgtc
gaagcgcgcgcgcgcgacatgctgtatccggagcagatctaccaggaattcgaaggcgaa
aacgccacctggtggaacttcgacccgcgcgtcgagtggctgctggactacctgctggcc
aaccgcaacgaaaaagtgctggtgatctgcgccaaggccgacaccgcgctgcagctggag
caggtgctgcgcgagcgtgaagcgatccgcgccgcggtgttccacgaagggctgtcgatc
atcgagcgcgaccgcgccgccgcctacttcgcctccgaagaggaaggcgcgcaggtgctg
ctgtgttccgagatcggctccgaaggccgcaacttccagttcgccagtcagctggtgatg
ttcgatctgccgttcaacccggatctgctggagcagcgtatcggccgtttggaccgtatc
ggccagatgcacgatatccaaatcatggtgccttacctggagcacaccgcgcaggcggtg
ctgggccgctggttccacgaggggctggatgccttcgaacacacctgcccgaccggccgc
accatctacgacagctgctacgagcagttgatcggctatctggccgcgccgaccgaacag
gaaggcttcgacgaattcatccacggctgccgccagcagcacgatcagttgaaagcgcag
ctggaacaaggccgcgaccgcctgctggagatgcactccaacggcggcgacaaagcccag
gcgctggctgccgccatcgccgagcaggataacgacgtcaatctggtgggcttcgcgctc
aacctgttcgacatcgtcggcatcaatcaggaagaccgcagcgacaacctgatcgtgctg
acgccgtccgatcacatgctggtgccggacttcccgggcctgccgcaggacggctgcacc
gtcaccttcgaccgcgatcgggcgctgtcgcgcgaagacgcgcagttcgtcagctgggag
cacccgatcatccgcaacggcctggatctgatcctgtccggcgacaccggcagctgcgca
gtgtccctgttgaagaacaaagcgttgccggtcggcaccctgctggttgagctggtctac
gtggtggaagcccaggcaccgaagcacctgcagctgacccgcttcctgccgccgacgccg
atccgcatgctgatggatcgcaagggcaccaacctggcggcgcaggtcgagttcgaaagc
ttcaaccgccagctgaacgcggtcaaccgccacacctccagcaagctggtcaacgccgtg
cagcaagacgtgcacgccatgctgcagcaggcggaaagcctggtggaagcgcaggcgcgc
acgcttatcgaacaggcgaagcaagaggcggacgacaagctgagcgccgagctggcgcgt
ctggaagcgctgaaggcggtcaacccgaacatccgcgacgacgaagtcgaagcgctggag
ttcaaccgccgtcaggtgctggccaacctcaatgaagccggctggcgtctggacgccatt
cgtctggtggtggtcacccaccagtaa
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