Serratia sp. HRI: GF111_12000
Help
Entry
GF111_12000 CDS
T10951
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
serh Serratia sp. HRI
Pathway
serh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GF111_12000 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serh03019
]
GF111_12000 (recQ)
03400 DNA repair and recombination proteins [BR:
serh03400
]
GF111_12000 (recQ)
Enzymes [BR:
serh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GF111_12000 (recQ)
Messenger RNA biogenesis [BR:
serh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GF111_12000 (recQ)
DNA repair and recombination proteins [BR:
serh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GF111_12000 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
zf-CXXC
DUF6972
Motif
Other DBs
NCBI-ProteinID:
UBI66511
LinkDB
All DBs
Position
complement(2486034..2487866)
Genome browser
AA seq
610 aa
AA seq
DB search
MSTAAVINRELLAEQVLRDTFGYQQFRPGQQTIINAAIGGQDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLLAYGVSAACYNSTQTREEQLDVMAGCRNGTIKMLY
IAPERLMMESFLSLLDHCPPAMLAVDEAHCISQWGHDFRPEYRALGQLKQRFSSMPVIAL
TATADESTRGDIVRLLSLQNPLVQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTAARLQSRGLSVGAYHAGLDNDRRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKPAGQQ
LDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKHENCGNCDICLDPPKRYDGLEDARKAL
SCVYRVGQRFGLGYIVEVLRGSNNQRIREYGHDKLPVYGIGRDQTTEHWTSVLRQLIHLG
FITQNIAMHSALQLTEAARPVLRGEVALQLAVPRIQSLKSRSSANQKSYGGNYDRKLFAK
LRKLRKSIADEENIPPYVVFNDATLLEMAEQMPIKAGDLLSVNGVGQRKLERFGAPFMAM
IRDHLDNDED
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaaccgcagcagtgattaacagagagttgctggccgagcaggtattgcgcgatacc
tttggctaccagcaattccgtccgggccaacaaacgattatcaacgccgcgatcggcggg
caggattgcctggtggtgatgccgaccggcggcggcaagtcgctgtgttaccaaatcccg
gcgctggtgatggacggcctgacgctggtcgtttccccgttgatctcgctgatgaaggac
caggtcgaccaactgttggcctacggcgtttccgccgcctgctacaactcgacgcaaacc
cgcgaggagcagctggacgttatggccggctgccgcaacggcaccatcaagatgctgtac
atcgcgccggaacggctgatgatggaaagcttcctcagcctgctcgatcactgtccgccg
gcgatgctggcggtggatgaggcgcactgtatttcgcagtggggccatgacttccggccg
gaatatcgcgcgctgggtcagctgaaacagcgcttctcgtcgatgccggtgatcgcgctg
accgccaccgccgacgagtccacccgcggcgatatcgtgcgcctgctgtcgctgcagaac
ccgctggtgcaggtcagcagcttcgaccggccgaacatccgctacacgctggtggaaaaa
ttcaagccgctcgatcagctgtggcgcttcgtgcaggatcagcgcggcaagagcggcatt
atctattgcaacagccgcgccaaggtggaagacaccgctgcgcgtctgcaaagccgcggg
ctgagcgtcggcgcctaccacgccgggctggacaacgatcgccgcgcgcaggtgcaggaa
gcgttccagcgtgacgatctgcaggtggtggtggccaccgtcgccttcggcatgggcatc
aataaacccaacgtgcgcttcgtggtgcatttcgatatcccgcgcaatatcgaatcctat
tatcaggagaccggccgcgccgggcgcgacggcctgccggccgaagccatcctgctgtac
gatccggccgacatggcctggctgcgccgctgcctggaggaaaaacccgccggacagcag
ctggatatcgagcgccacaagctgaacgccatgggcgcgttcgccgaggcgcaaacctgc
cgccgtctggtgctgctcaactacttcggcgaaggcaagcacgagaactgcggcaactgc
gacatttgcctcgatccgcccaagcgctacgacgggctggaggacgcgcgcaaggcgctg
tcctgcgtgtaccgcgtcggccagcgcttcggcctcgggtacatcgtggaagtgctgcgc
ggttccaacaaccaacgcattcgcgaatacggccacgataagctgccggtgtacggcatc
ggccgcgatcaaaccaccgaacactggaccagcgtgctgcgtcaactgatccacctgggc
tttatcacccagaacatcgccatgcactcggcgctgcaattgaccgaggcggcgcgcccg
gtgttgcgcggtgaggtggcgctgcagctggcggtgccgcgcatccagagcctgaagtcg
cgcagcagcgccaaccagaaatcctacggcggcaattacgatcgcaagctgttcgccaag
ctgcgcaaactgcgcaaatcgatcgccgacgaagaaaacattccgccctacgtggtgttc
aacgacgccacgctgctggaaatggccgaacagatgccaatcaaggccggcgatctgctg
agcgtcaatggcgtcggccagcgcaaactggagcgtttcggcgcgccctttatggcgatg
atccgcgaccatctcgacaatgatgaagactga
DBGET
integrated database retrieval system
