Serratia sp. HRI: GF111_12030
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Entry
GF111_12030 CDS
T10951
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
serh Serratia sp. HRI
Pathway
serh03420
Nucleotide excision repair
serh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GF111_12030 (uvrD)
03430 Mismatch repair
GF111_12030 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serh03400
]
GF111_12030 (uvrD)
Enzymes [BR:
serh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GF111_12030 (uvrD)
DNA repair and recombination proteins [BR:
serh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GF111_12030 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GF111_12030 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
PhoH
Motif
Other DBs
NCBI-ProteinID:
UBI66516
LinkDB
All DBs
Position
complement(2492345..2494507)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHLEANLPQDFQILDSDDQL
RLLKRIIKALNVDEKQWPPRQAMWYINGKKDEGLRPQHVETYNNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNVLVDEFQDTNSIQYAWIRLLAGGN
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILKAANTLIANN
DGRMGKNLWTEGGEGEPISIYCAFNELDEARFVVNRIKTWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRELMQDKVLAGRAASALQRFIELVESLAHETADMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRASVSRPVNHRRMG
TPISENDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQIAFPGEGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtctccgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggcggcg
ccgcgcagcaacctgttggttctggccggggcgggcagcggcaagacccgggtactggtg
catcgcatcgcctggctgctgtcggtggagaactgttcgccgtattcgattatggcggta
accttcaccaacaaggcggcggcggaaatgcgccaccgtatcgaacatctgatcggcacc
agccagggcggcatgtggatcggcaccttccacggcctggcgcatcgtctgttgcgcgcc
caccacctggaagccaacctgccgcaggatttccagatcctcgacagcgacgaccagctg
cggctgctcaagcgcatcatcaaggcgctgaacgtcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacggcaagaaagacgagggcctgcggccacagcacgtcgag
acctacaacaatccggtagaggccacctggctgcgcatctatcaggcctatcaggaagcc
tgcgatcgcgcggggctggtggatttcgccgagctgctgctgcgcgcgcacgagctgtgg
ttgaacaagccgcatatcctcaaccactaccgcgaacgtttcaccaacgtgctggtggac
gaattccaggataccaacagcatccagtacgcctggatccgtctgctggcgggcggcaac
agcaacgtgatgatcgtcggtgacgatgaccagtcgatctacggctggcgcggcgcgcag
gtggaaaacatccagcgcttcctgaaagatttccccggtgcggaaaccatccgcctggag
cagaactaccgttccaccagcaacatcctgaaagcggccaacaccctgatcgccaacaac
gacgggcgcatgggcaaaaacctgtggaccgaaggcggcgaaggcgaaccgatctccatc
tactgtgccttcaacgaactcgacgaagcgcgcttcgtggtcaaccgcatcaagacctgg
caggacaacggcggggcgctgaacgactgcgccatcctgtaccgcagcaacgcccagtcg
cgcgtgctggaagaggcgctgctgcagacggcgatgccgtaccgcatctacggcggccag
cgcttcttcgaacgccaggaaatcaaggatgcgctggcttacctgcgcctcatttccaac
cgcaacgacgatgcggccttcgagcgcgtggtcaacaccccgacgcgcggcatcggcgat
cgtaccctcgacgtggtgcgccaggcggcgcgcgatcgtcagctgacgctgtggcaggcg
acgcgcgagctgatgcaggacaaagtgttggccggccgcgccgcgtcggcgctgcagcgc
tttatcgaactggtggagtcgctggcgcatgaaaccgccgacatgccgctccacgtgcag
accgaccgggtgatccgcgattccgggctgttcatcatgtatgagcaggagaaaggcgaa
aaggggcaggcgcgcatcgaaaaccttgaggaattggtgacggcaacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgctgcaggcgttcctgtcgcatgcggcgctg
gaggcgggcgaaggccaggccgacgcctatcaggacgcggtgcagctgatgaccctgcac
tccgccaagggcctggagttcccgctggtgtttatcgtcggcatggaagaaggcatgttc
ccgagccagatgtcgctggatgaaggcggccgtctggaggaggagcgccgcctggcctat
gtgggcgtaacgcgcgccatgcagaagctaacgctgacctatgccgaaacgcgccgtctg
tacggcaaagaggtttaccaccggccgtcgcgctttatcggcgagctgccggaagagtgc
gtggaagaagtgcgcctgcgcgccagcgtatcgcgcccggtcaatcaccgccgcatgggc
acgccgatcagtgagaacgataccggctacaagctgggccagcgcgtgcgccaccccaag
tttggcgaaggcaccatcgtcaatctggagggcagcggcgagcacagccggctgcagatc
gctttcccgggcgagggcatcaagtggctggtggcggcctacgctcgcctggaaacggta
taa
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