Serratia sp. HRI: GF111_16855
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Entry
GF111_16855 CDS
T10951
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
serh Serratia sp. HRI
Pathway
serh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GF111_16855 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serh03019
]
GF111_16855 (pcnB)
Enzymes [BR:
serh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
GF111_16855 (pcnB)
Messenger RNA biogenesis [BR:
serh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
GF111_16855 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UBI62530
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All DBs
Position
complement(3515564..3516880)
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AA seq
438 aa
AA seq
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MTVIPREQHSISRKDISENALKVLYRLNKSGYEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQNQESDKNSSQQAQNGMLLR
DNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVGGLNDLKQGVIRLIGDPETRYREDPV
RMLRAVRFAAKLDMRISEETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGFQTYLKLC
EYQLFQPLFPLIARNFTPNHDTPMERILVQVLKNTDHRLQNDMRVNPAFLFAAMLWYPLL
EHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGKR
AHKLMEHPKFRAAYDLLALRAEVEDNQEMLRLAEWWGEFQDATPARQKAMLSTLGDDPAP
RRARQRRPRRRAPRKEGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcccgcgcgaacagcactcgatctcccgcaaagacatcagcgaaaatgcg
ctgaaagtgctttaccgcctgaacaagtcaggctacgaagcctatctggtcggcggcggc
gtgcgcgatctgttgctcggcaaaaagccgaaagacttcgacatcaccaccaacgccacg
ccggagcaagtgcgcaagctgttccgcaactgccgcctggtcggccgccgcttccgcttg
gcgcacgtgatgttcgggccggagatcatcgaagtggccactttccgcggccaccacgaa
cagaatcaggaatccgacaaaaactcgtcccagcaggcgcaaaacggcatgctgctgcgc
gacaacatcttcggctcgatcgaggaagacgcccagcgccgtgatttcaccatcaacagc
ctgtactacggcgtggcggatttcaccctgcgcgattacgtcggcggcctgaacgacctg
aaacagggcgtgattcgcctgattggcgatccggaaacccgctaccgcgaagatccggtg
cgcatgctgcgcgcggtgcgcttcgccgccaagctggatatgcgcatcagcgaagagacc
gccgagccgatcccgcgcctggcctcgctgctgcatgagatcccgccggcgcgcctgttc
gaagaatccctcaagctgctgcaggcgggttacggtttccagacctacctgaagctgtgc
gaataccagctgttccaaccgctgttcccgctgatcgcccgcaacttcacgccgaaccac
gatacgccgatggagcgcattctggtgcaggtgctgaagaacaccgatcaccgtctgcag
aacgacatgcgcgtcaacccggccttcctgtttgccgccatgctgtggtacccgctgctg
gagcatgcgcagaagctggcgcaggaaagcggcctggcctactacgacgccttcgcgctg
gcgatgaacgacgtactcgacgagcagtgccgttcgctggccatcccgaaacgcatcacc
acgctggtgcgcgatatctggcagctgcagctgcgcctgtcccgccgccagggcaaacgc
gcgcacaagctgatggagcacccgaaattccgcgccgcctatgatctgctggcgttgcgt
gcggaagtggaagacaatcaggagatgctgcgtttggccgagtggtggggcgaattccag
gacgccacgccggcgcggcagaaagccatgctgagcaccctgggggacgatccggcgccg
cgccgcgcgcgtcaacgccgccctcgccgccgggcaccgcgtaaagaaggggcataa
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