Serratia sp. HRI: GF111_20280
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Entry
GF111_20280 CDS
T10951
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
serh Serratia sp. HRI
Pathway
serh00071
Fatty acid degradation
serh00280
Valine, leucine and isoleucine degradation
serh00310
Lysine degradation
serh00362
Benzoate degradation
serh00380
Tryptophan metabolism
serh00410
beta-Alanine metabolism
serh00640
Propanoate metabolism
serh00650
Butanoate metabolism
serh00907
Pinene, camphor and geraniol degradation
serh00930
Caprolactam degradation
serh01100
Metabolic pathways
serh01110
Biosynthesis of secondary metabolites
serh01120
Microbial metabolism in diverse environments
serh01200
Carbon metabolism
serh01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GF111_20280 (fadJ)
00650 Butanoate metabolism
GF111_20280 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
GF111_20280 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GF111_20280 (fadJ)
00310 Lysine degradation
GF111_20280 (fadJ)
00380 Tryptophan metabolism
GF111_20280 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GF111_20280 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GF111_20280 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GF111_20280 (fadJ)
00930 Caprolactam degradation
GF111_20280 (fadJ)
Enzymes [BR:
serh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GF111_20280 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GF111_20280 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GF111_20280 (fadJ)
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Paralog
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GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
UBI66905
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All DBs
Position
4234814..4236979
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AA seq
721 aa
AA seq
DB search
MSFENALHEQRAKPSAFQLTIRPDNIGVITIDVPGDKVNTLKAEFVEQVNDVLIRAQQHT
ALEGLVIVSGKPDSFIAGADITMIAACTSAKEAETLAKKGQSTLAQIAAFPVPVVAAIHG
ACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLVGAAKALDMILT
GKHIRARQALRMGLVDDAVPQSILLQTAIERVKQGWKHQRELPWQDRLLNGPLGKNLLFS
IVRKKTLAKTHGNYPAAERIIQVVRSGLDHGSASGYEAEARAFGELAMTPQSAALRSLFF
ASTALKKERGGNAQPRALHRVGILGGGLMGGGIACVTATRGGLPVRIKDINETGINHALK
YSWDVLGKRVRSKRMRPAERQKQMMLISGSTDYTGFEQVDIVVEAVFEDLALKQQMVAEV
EANCATHTVFASNTSSLPIGRIAEKAQRPQQVIGLHYFSPVDKMPLVEVIPHAGTSEETI
ATTVALAHKQGKTAIVVGDSAGFYVNRILAPYINEAARCLLEGEPIESLDKALVDFGFPV
GPITLLDEVGIDVGTKIIPVLVEALGPRFAAPAAFDAVLKDGRKGRKNGRGFYLYPSEGQ
QRQRRKRADTSLYTLLGVTPKAHMLPATVAQRCVMMMLNEAARCLDEGVIRSARDGDVGA
VFGIGFPPFLGGPFRYMDELGAEKVVKTLDYLRQQHGEHFAPCERLQRMAQQGERFYPLG
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgaaaacgcattgcatgaacagcgcgccaaaccgtcggcctttcagctgacg
attcgccccgacaacatcggcgtgatcaccatcgacgtaccgggcgacaaggtgaacacg
ctcaaggccgagttcgtcgaacaggtgaacgacgtgctgatccgggcgcaacagcatacc
gcgctggaagggctggtgatcgtttccggcaagccggactcgtttatcgccggcgccgac
atcaccatgatcgccgcctgcaccagcgccaaagaggcggaaacgctggccaagaaaggg
cagagcacgctggcgcagatcgccgcgttcccggtgccggtggtggcggccattcacggc
gcctgcctgggcggtgggctggaactggcgctggcctgccacggccgcgtctgttcgctc
gatgacaaaaccgcgctcgggctgccggaagtgcagctgggcctgctgccgggctccggc
ggtacgcagcgcctaccgcgcctggtcggcgccgccaaggcgttggacatgatcctgacc
ggcaagcacattcgcgcccgccaggcgctgcgcatggggttggtggacgacgccgtgccg
cagtcgattctgttgcagaccgctatcgagcgggtgaaacagggctggaaacatcagcgc
gagctgccgtggcaggatcgcctgctcaacggcccgctgggcaaaaatctgctgttcagc
atcgtgcgcaagaaaacgttggcgaaaacccacggcaactacccggcggcggagcgcatc
attcaggtggtgcgctccgggctggatcacggcagcgccagcggttatgaggccgaagcg
cgcgccttcggcgaactggcgatgacgccgcagtcggcggcgctgcgcagcctgttcttc
gcctccaccgcgctgaaaaaagagcggggcggcaatgctcagccgcgcgccctgcaccgc
gtcggcattctcggcggcggtctgatgggcggcggcatcgcctgcgtcaccgccacccgc
ggcggtttgccggttcgtatcaaagacatcaatgaaaccggcatcaatcacgcgctgaaa
tacagctgggacgtgctcggcaagcgggtgcgcagcaagcgcatgcgcccggccgagcgg
caaaaacagatgatgctgatctccggctctaccgattacaccggctttgaacaggtggat
atcgtggtcgaggcggtgtttgaagatttggcgctgaagcagcagatggtggccgaggtc
gaagcaaactgcgcgacgcataccgtgttcgcctccaatacctcctcgctgcctatcggc
cgcatcgccgaaaaagcccagcggccgcagcaggtgatcggcctgcactacttcagcccg
gtggacaagatgccgctggtggaagtgatcccgcacgccggcaccagtgaagagaccatc
gccaccaccgtggcgttggcgcacaagcagggcaagaccgccatcgtggtgggcgacagc
gccggtttttacgtcaaccgcatcctggcgccgtacatcaacgaagcggcgcgctgcctg
ctggaaggcgagccgattgagtcgctggacaaggcgctggtggacttcggtttcccggtc
ggcccgatcaccctgctggatgaagtgggcatcgacgtcggcaccaagatcatcccggta
ctggtcgaggcgctggggccgcgcttcgctgcgccggctgcgttcgatgcggtgctgaaa
gacgggcgcaaagggcgcaagaacggccgcggcttctatctctacccgagcgaagggcag
cagcggcagcggcgcaaacgtgcggatacctcattgtatacgctgctcggcgtcacgccg
aaggcgcacatgctgccggcgaccgtcgctcaacgctgcgtgatgatgatgctgaacgaa
gcggcgcgctgcctggacgaaggcgtgatccgcagcgcgcgcgacggcgacgtcggcgca
gtgttcggcatcggcttcccgccgttcctcggtggcccgttccgctatatggacgagctc
ggcgccgagaaagtggtaaagacgctggactacctgcgtcagcagcacggcgaacacttc
gccccgtgcgaacgcttgcagcgcatggcgcagcagggcgagcgcttttacccgctgggg
agctga
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