Serratia sp. HRI: GF111_20810
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Entry
GF111_20810 CDS
T10951
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
serh Serratia sp. HRI
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serh03032
]
GF111_20810 (gyrA)
03400 DNA repair and recombination proteins [BR:
serh03400
]
GF111_20810 (gyrA)
Enzymes [BR:
serh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GF111_20810 (gyrA)
DNA replication proteins [BR:
serh03032
]
Prokaryotic type
DNA Topoisomerases
GF111_20810 (gyrA)
DNA repair and recombination proteins [BR:
serh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GF111_20810 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
UBI63264
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Position
4347304..4349946
Genome browser
AA seq
880 aa
AA seq
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MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGASGIAVGMAT
NIPPHNLTEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKI
YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLNFIAELIFILESPERLMEVIREELVAVKELYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDSVISLIVPRGEGDILTVTQNGFGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEAVEEDTTPLDDGDDAAEPMDDDNV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttgaaaaactcg
tatctggattatgcgatgtccgttattgtcggacgtgcgctgccagatgttcgtgatgga
ctgaagccggttcaccgccgcgttctgtacgcgatgagcgtactgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaatatcacccacac
ggtgacagcgcggtttacgacactatcgtgcgtatggcccagccgttttcactgcgctac
atgctggtggacggccagggtaacttcggttccgtcgacggcgactccgccgcggcaatg
cgttataccgaagtgcgcatgtccaagattgctcacgaactgttggcggacctggaaaaa
gaaaccgtcgacttcgtgcctaactatgatggcaccgagcagatcccggccgtcatgccg
accaagatcccgaacctgctggtcaacggcgcatcgggcatcgccgtgggcatggctacc
aatattccgccgcacaacctgacagaagtcgtcaacggctgcctggcctatatcgacgat
gaaaacatcagcatcgaagggctgatggaacacatcccggggccggacttcccgacggcg
gcgatcatcaacggccgccgcggcattgaagaggcctaccgcaccgggcgcggtaaaatc
tacctgcgcgcgcgcgcggaagtggaagccgacgccaagaccgggcgcgaaaccatcatc
gttcacgagatcccgtatcaggtgaacaaggcgcgtctgatcgagaagatcgccgagctg
gtgaaagaaaagcgcgtggaaggcatcagcgcgctgcgcgacgagtccgataaagacggc
atgcgcatcgtgatcgaagtcaaacgcgatgcggtcggcgaagtggtgctgaacaacctg
tatgcgctgacgcaactgcaggtcaccttcggcatcaacatggtcgcgctgcatcagggc
cagcctaagctgctgaacctgaaagacatcctcgaagccttcgtgcgtcaccgccgcgaa
gtggttacccgccgcaccatcttcgaactgcgcaaggcccgcgaccgcgcccatattctg
gaagcgctggccatcgcgctggccaacatcgatccgatcatcgagctgattcgccgtgcg
ccgaccccggccgaagcgaaagttgcgctggtggcgcagccgtgggatctgggcaacgtc
agcgccatgctggagcgcgccggtgacgacgccgcccgtcctgagtggctggagccggag
ttcggcatccgcgacggcaaatactacctgaccgagcagcaggctcaggcgattctggat
ctgcgcctgcagaaactgaccggcctggagcacgagaagctgctggacgaatataaagaa
ctgctcaactttatcgccgagctgatctttattctggaaagcccagagcgcctgatggaa
gtgatccgcgaagagctggtggcagtcaaagagctgtacaacgacggccgccgcaccgag
atcaccgccaatacttccgacatcaacatcgaagacctgatcaaccaggaagacgtggtg
gtgaccctgtctcatcagggctacgtgaagtatcagccgctgtccgactatgaagctcaa
cgccgcggcggcaaaggcaaatctgcggcgcgtattaaagaagaagactttatcgatcgc
ctgctggtggccaacacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtaccaactgcctgaagccagccgtggcgcgcgcggtcgcccaatcgtc
aacctgctgccgctggaagccgatgagcgtatcaccgccatcctgccggtgcgcgagtat
gaagaagggcgccacgtgttcatggccaccgccagcggtaccgtgaagaaaaccgcgctg
accgagtttagccgtccgcgcagcgccggcatcatcgccgtcaacctcaacgagggcgac
gaactgatcggtgtcgatctgaccgacggcagcaatgaagtgatgttgttctccgccaac
ggtaaagtggtacgcttcccggaaacgcaggtgcgttcgatgggccgtaccgcaaccggc
gtgcgcggcatcaaccttggcgaaggcgacagcgtgatctccctgatcgtgccgcgcggc
gaaggcgacatcctgaccgtgacgcaaaacggcttcggtaaacgcaccgccgtgaccgaa
tatccgaccaagtcacgcgccacccagggggttatctccatcaaggtgagcgagcgtaac
ggccaggtggtcggcgccgtacaggtggaaaccagcgaccagatcatgatgatcaccgat
gccggcacgctggtgcgtacccgcgtttcggaagtcagcgtggtgggccgtaacacccag
ggcgtgacgctgatccgcacggcggaagacgaaaacgtcgtcggcctgcagcgcgtggcc
gagccggtggaagacgaagagctggacagcctggaaccgggggcggaagcggtggaagaa
gacaccacgccgctggacgatggcgacgacgcggctgagccgatggacgacgacaacgtt
taa
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