Serratia sp. HRI: GF111_21195
Help
Entry
GF111_21195 CDS
T10951
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
serh Serratia sp. HRI
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serh03400
]
GF111_21195
DNA repair and recombination proteins [BR:
serh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
GF111_21195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
DUF7577
Zn_ribbon_3
zf-tcix
AAA_16
Zn_Ribbon_1
SLFN-g3_helicase
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
UBI63329
LinkDB
All DBs
Position
complement(4422985..4424742)
Genome browser
AA seq
585 aa
AA seq
DB search
MAFTLRPYQLEAVEATINHFRRHPEPALIVLPTGAGKSLVIAELAKRARGRVLVLAHVKE
LVAQNHAKYCAYGLEADIFAAGLQQKESAGKVVFGSVQSVARNLPLFDGAFSLLIVDECH
RISDDDDSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGFTRGDGASLFRD
CIYELPLRYMIKNGFLVPPERLDMPIVQYDFSRLEARSNGLFSEADLNRELKRQNRVTPH
IISQIVEYAEDRKGVMIFAATVEHAREIHGLLPTGEAALVSAETPAAERDALIEAFKQQR
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKEDCLILDYAGNP
HDLFTPEVGVSKPHGDSQPVQVFCPACGFANLFWGKCTENGDIIEHYGRRCQGWLEDDDG
HREQCDYRFRFKSCPHCGAENDIAARRCHQCQEVLVDPDDMLKAALKLKDALVLRCGGME
LQSGRDDKGEWLKATYYDEDGTSTSERFRLQTPAQRKAFEMLFLRPHQRAPGVPFAWHTA
ADVLAQQQALRHPDFVVARKRGQFWQVREKVFDYQGRFRRANQLA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcctttaccctacgcccctaccaactggaagcggtcgaagccaccatcaatcatttc
cggcggcatcccgaaccggcgctgatcgtgctgccgaccggcgccggcaaaagcctggtg
atcgccgagctggcgaagcgcgcccgcgggcgggtgctggtgttggcgcacgtcaaggaa
ctggtggcgcaaaaccacgccaaatactgcgcctacggcctggaagcggacatcttcgcc
gccggcctgcagcagaaagagagcgccggcaaggtggtgttcggcagcgtgcagtcggtg
gcgcgcaacctgccgctgttcgacggcgccttttcgctgctgatcgtcgatgaatgccac
cgcatcagcgacgacgacgacagccagtaccagcaaatcatccagcatttgcagaaaacc
aacccgcagctgcggctgctggggctgaccgccacgccctatcgcttgggcaagggctgg
atttaccagtatcactaccacggcttcacccgcggcgacggcgccagcctgtttcgcgac
tgcatctacgagctgccgctgcgctatatgattaagaacggcttcctggtgccgcctgag
cggctggacatgccgatcgtgcagtacgatttcagccggctggaagccagaagcaacggc
ctgttcagcgaagcggatctgaaccgcgagctgaagcggcaaaaccgcgtcacgccgcac
atcatcagccagattgtggagtacgccgaagaccgcaaaggggtgatgatcttcgccgcc
accgtcgagcacgcccgcgagatccacggcctgctgccgaccggcgaggccgcgctggtc
agcgccgaaacgccggccgccgagcgcgatgcgctgatcgaggcgttcaaacagcagcgt
ctgcgctatctggtcaacgtcgcggtattgaccaccggcttcgacgcgccgcacgtcgat
ctgatcgcgatcctgcgcccgaccgagtccgtcagcctgtatcagcaaatcgtcggccgc
gggctgcggctggcgcccggcaaggaggattgcctgatcctcgactacgccggcaacccg
cacgacctgttcacgccggaggtcggcgtcagcaagccgcacggcgacagtcaaccggtg
caggtgttctgcccggcctgcggcttcgccaacctgttctggggcaagtgcaccgaaaac
ggcgacattatcgagcactacggccgccgctgtcagggctggctggaggacgacgacggc
caccgcgagcagtgcgattaccgcttccggttcaagagctgcccgcactgcggcgcggag
aacgacatcgccgcgcgccgctgccatcagtgccaggaggttctggtcgatcccgacgac
atgctgaaagcggcgctgaagctgaaagacgcgctggtgctgcgctgcggcggcatggag
ctgcaaagcggccgcgacgacaagggcgaatggctgaaggccacctattacgacgaggac
ggcaccagcaccagcgagcgcttccgcctgcagacgccggcgcagcgcaaagcgttcgag
atgctgttcctgcgcccgcatcagcgcgcgccgggcgtgccgttcgcctggcacaccgcc
gccgacgtgctggcgcaacagcaggcgctgcgccatccggatttcgtggtggcgcgcaaa
cgcgggcagttttggcaggtgcgcgagaaagtgttcgattatcaaggccgtttccgccgc
gccaatcaattggcctga
DBGET
integrated database retrieval system
