Serratia sp. HRI: GF111_23540
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Entry
GF111_23540 CDS
T10951
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
serh Serratia sp. HRI
Pathway
serh02020
Two-component system
serh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GF111_23540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GF111_23540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serh03021
]
GF111_23540
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
serh02035
]
GF111_23540
Transcription machinery [BR:
serh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GF111_23540
Bacterial motility proteins [BR:
serh02035
]
Flagellar system
Flagellar assembly proteins
Stator
GF111_23540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0147
HTH_23
UPF0122
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
UBI63766
LinkDB
All DBs
Position
4921867..4922589
Genome browser
AA seq
240 aa
AA seq
DB search
MSDLYTAEGVMDKNSLWLRYVPLVRHEALRLQVRLPASVELDDLLQAGGIGLLNAVERYD
ALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRHAREVAQVMRQLEQRYGRPASETEV
AQTLNISLDEYRQILLDTNNSQLFSYDEWREEHGENAEPMLEGHEEANPLHHLLEGSLRQ
RVIDAIEALPEREKMVLTLYYQEELNLKEIGAVLDVGESRVSQLHSQAIKRLRARLANDT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatctgtataccgccgaaggcgtgatggacaaaaattctctctggctgcgctac
gtcccgttagtgcgccacgaggcgttgcgcctgcaggtcaggttgcccgccagcgtggag
cttgacgacttgctgcaggccgggggaatcgggttattgaacgccgttgagcgttatgac
gccctacagggaaccgcctttaccacctatgcggtgcaacgcattcgcggcgcgatgctc
gacgaactgcgcagccgcgactgggtgccgcgcagcgtgcggcgccatgcgcgcgaggtc
gcgcaggtgatgcggcaactggaacagcgttatggccgtccggcgagcgagacggaagtg
gcgcagacgctgaatatctcgctggatgagtaccgtcaaattctgttggacaccaataac
agccagcttttctcctacgacgaatggcgcgaggagcatggcgagaacgcggaaccgatg
ctggaagggcatgaagaggccaacccgctgcatcacctgttggaaggcagcctgcgccag
cgggtgatcgacgccatcgaggcgttgccggagcgcgaaaaaatggtgctgacgctgtat
taccaggaagagttgaatctcaaagagatcggcgccgtgctggacgtcggggaatcccgc
gtcagccaattgcacagtcaggcgatcaaacggctgcgcgcgcggctggcgaacgatacc
tga
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