Serratia sp. HRI: GF111_24400
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Entry
GF111_24400 CDS
T10951
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
serh Serratia sp. HRI
Pathway
serh00061
Fatty acid biosynthesis
serh00071
Fatty acid degradation
serh01100
Metabolic pathways
serh01212
Fatty acid metabolism
serh02024
Quorum sensing
serh04146
Peroxisome
Module
serh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
serh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GF111_24400 (fadD)
00071 Fatty acid degradation
GF111_24400 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GF111_24400 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
GF111_24400 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
serh01004
]
GF111_24400 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serh04147
]
GF111_24400 (fadD)
Enzymes [BR:
serh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GF111_24400 (fadD)
Lipid biosynthesis proteins [BR:
serh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GF111_24400 (fadD)
Exosome [BR:
serh04147
]
Exosomal proteins
Exosomal proteins of breast milk
GF111_24400 (fadD)
Exosomal proteins of breast cancer cells
GF111_24400 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
UBI63921
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All DBs
Position
5094360..5096048
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AA seq
562 aa
AA seq
DB search
MDKVWLKRYPADVPAEIDADRYSSLIEMFEHAVQRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQNELGLKKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVFNTPIKHVILTRMGDQLSAAKGTLVNFVVKYVKRLVPKYNL
PDAISFRSALQRGRRLQYVKPDIINADLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA
AYLPLFREGQELVVTALPLYHIFALTVNCLLFIDLGGRNLLITNPRDIPGLVKELGKYPF
TVMSGVNTLFNALLNNEDFHKLDFSTLRFSVGGGMSVQKAVAEKWEQTTGKHLLEGYGLT
ECAPLVAGNPYDLKHYSGSIGLPVPSTDIRLVDDNGHDVPSGEPGELWVKGPQVMLGYWQ
RPDATDEVLKDGWLATGDVVTVDDQGFVRIVDRKKDMILVSGFNVYPNEIEDVVSQHPKV
LECAAIGVPSEVSGETVKICVVKKDASLTKEELLTHCRRHLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQKTPKPADAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggataaggtctggttaaaacggtatccggcagatgtgcccgcagagattgatgccgat
cgctattcgtcgttgatcgaaatgtttgagcatgccgtgcaacgctatgccgatcagcct
gcctttatcaacatgggcgaggtgatgaccttccgcaaactggaagaacgcagccgggct
ttcgcggcttacctgcaaaatgaactgggcctgaagaagggcgaccgcgtcgcgctgatg
atgccaaacctgttgcaataccccatcgcgctgttcggcattctgcgcgccggcatggtg
gtggtcaacgtcaacccgctgtataccccgcgcgagctggagcaccagttgaacgacagc
ggtgccagcgccatcgtcatcgtctccaactttgcccatacgctggaaaaagtggtgttc
aacaccccgatcaaacacgtgatcctgacgcgcatgggcgatcagctttcggccgccaaa
ggcacgctggtcaacttcgtggtcaagtacgttaagcgcctggtaccgaaatacaacctg
ccggacgccatttcattccgcagcgcgctgcagcgcggccggcgtctgcaatatgtgaaa
ccggacatcattaatgccgatctggccttcctgcaatacaccggcggcaccaccggggtg
gcaaagggcgcgatgttgacgcaccgcaacatgcaggccaacctcgagcaggccaaagcc
gcctatttgccgctgttccgcgaagggcaggaactggtggtgacggcgttgccgctgtat
cacattttcgcgctgacggtgaactgcctgctgtttatcgacctgggcgggcgcaatttg
ctgatcactaatccgcgcgatattccggggctggtgaaggaactcggcaaatatccgttc
accgtcatgagcggggtcaataccttgttcaacgcgttgctgaacaacgaggatttccac
aagctcgatttctctacgctgcgtttctcggtcggcggcgggatgtcggtgcaaaaagcg
gtggccgagaagtgggagcaaaccaccggcaaacacctgctggaaggctatggcctgacg
gagtgcgcgccgctggtggccggtaacccttacgatctgaaacactacagcggcagcatc
ggtttgccggtgccgtcgacggacattcggctggttgacgacaacggtcacgatgtgccg
tcgggcgaacccggcgaactgtgggtcaaagggccgcaagttatgttaggctattggcag
cgcccggatgccaccgacgaagtgctgaaagacggctggctggcgaccggtgatgtggtg
accgtagacgatcaggggtttgtgcgcatcgtcgaccgtaagaaagacatgatcctggtc
tccggtttcaacgtttacccgaacgaaatcgaggacgtggtcagccagcatccgaaggtg
cttgaatgtgcggcgatcggtgtgcccagcgaagtctccggcgaaacggtgaagatctgc
gtggtgaagaaagacgcctcgctgaccaaggaagagctgttgacccattgccgtcgccac
ctgaccgggtataaagtgcctaaaattgttgagttccgcgatgaactgccgaagtcgaac
gtcggcaagattttgcggcgagaactgcgtgatgagcaaaaaacaccaaaaccggccgat
gccgcctag
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