Spiroplasma eriocheiris: SERIO_v1c02360
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Entry
SERIO_v1c02360 CDS
T03974
Symbol
rpoE
Name
(GenBank) DNA directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
seri
Spiroplasma eriocheiris
Pathway
seri03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
seri00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SERIO_v1c02360 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seri03021
]
SERIO_v1c02360 (rpoE)
03400 DNA repair and recombination proteins [BR:
seri03400
]
SERIO_v1c02360 (rpoE)
Transcription machinery [BR:
seri03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SERIO_v1c02360 (rpoE)
DNA repair and recombination proteins [BR:
seri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SERIO_v1c02360 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Autophagy_act_C
Motif
Other DBs
NCBI-ProteinID:
AKM53822
UniProt:
A0A0H3XLX0
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All DBs
Position
252169..252708
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AA seq
179 aa
AA seq
DB search
MMNDNVELLELVYEYLKKIKHSDTFENIWNAIAVNDISVQGHSKEDVIAELYTDLVLDNR
FVLTSEGMWGLRELLKYDEIKKQYDYTDQFETTEEFEDIDLDEEEDKDDLSDQLDFDDDL
DEDIDDDDDDEDLTEIDLDDDLAETEFSVDDDDQTVAAKLGITEEIDWQALEKEMEENN
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgataatgttgaattattagaattagtatatgaatatttaaagaaaattaaa
cacagtgatacttttgaaaatatatgaaatgccatcgctgtcaatgatatcagtgtccaa
ggacatagtaaagaagatgttattgctgaattatatactgatttagtattagataatcgt
tttgttttaacaagtgaaggtatgtgaggtttacgtgaacttttaaaatatgatgaaatt
aaaaaacaatatgattatactgatcaatttgaaacaactgaagagtttgaagatattgat
ttagatgaagaagaagataaagatgatctttctgatcaattagattttgatgacgatctt
gatgaagacattgatgatgatgacgatgatgaagatttaactgaaattgatttagatgat
gatttagcagaaaccgagttttcggttgatgatgatgaccaaacagtagctgctaaatta
ggaattactgaagaaattgactgacaagctttagaaaaagaaatggaagagaataattaa
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