Spiroplasma eriocheiris: SERIO_v1c03250
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Entry
SERIO_v1c03250 CDS
T03974
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
seri
Spiroplasma eriocheiris
Pathway
seri03420
Nucleotide excision repair
seri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SERIO_v1c03250 (pcrA)
03430 Mismatch repair
SERIO_v1c03250 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seri03400
]
SERIO_v1c03250 (pcrA)
Enzymes [BR:
seri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SERIO_v1c03250 (pcrA)
DNA repair and recombination proteins [BR:
seri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SERIO_v1c03250 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
SERIO_v1c03250 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AKM53907
UniProt:
A0A0H3XM25
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All DBs
Position
332119..334323
Genome browser
AA seq
734 aa
AA seq
DB search
MLNEFIKDLNPNQREAVLAINGPVRVIAGAGSGKTRVIINKIAYLVRYGNHKPWRICALT
FTNKAANEMKNRIVDLIGQEGRKTWISTYHALCVRILREDIETLGYPRSFNIIDTTDQDQ
IIRTIYKSANLKYDAQESRVVKSQISSWKNDFYSPSQVIDGAYENSDKKRWGYVYKEYEK
RLKELNSLDFNDLILFTHRLFSYHKDILAKWQDRFDYLLVDEFQDTNDLQFDIIKWLSET
KQNITVVGDPDQTIYSWRGAKIRLILNFEHYFKETQTIILDENYRSSQNILSLANDLIVN
NTNRIKKELFTSKELGVKPILYHASSSLDESDFIASKIIQLVKKEDYHYQDILILYRANY
LSRDIEGSLADYGISYRIYGAFKFYERKEIKDALALLKLVVNNEELALDRVLLFTPKIGP
KAVEQVKAILKEHQVTFSQLLLEHFDLLPNSLKNNLTALSEAIFSVNSLLQDTQSVKIVI
ETLLEKSGYLKRLEDNLETERVENIKELIDGIAKFDFQNADLQGLELVNEYLQLISLQTD
HDNDEINDDSVSLMTIHNAKGLENKVVFIVGLNEGIFPSIQAIKSGESELEEERRTLYVA
ITRARELLFISYADGYSYVTGNERFPSRFVKELNPDFLETIESDLLGTTVKYKSNYSLDG
EWENSLSNFSNNALNTSSQPSHENWSIDDSVSHEIFGIGVVVKKIGANIQVIFPSPIGSK
IISADSKAIKKVKN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatgaatttattaaagatttgaatcctaaccaacgcgaagcagtcttagcaatt
aatggaccggttcgagtaattgctggggctggtagtggtaaaacacgtgttattattaat
aaaattgcttatttagttcgttatggtaaccacaaaccatgaagaatttgtgccctaact
tttactaataaggcagctaatgaaatgaaaaatcggattgttgatttaattggccaggag
ggacgaaaaacttgaatttcaacttatcatgccttatgtgtgagaattttacgagaagat
attgaaaccctaggttatccgcgcagctttaatattattgataccactgaccaagaccaa
attattcgaacaatctataaatcggcaaacttaaaatatgatgcccaagaaagccgagta
gtaaagtcacaaattagtagttgaaaaaatgatttttattcaccaagtcaagttatcgat
ggcgcttatgaaaatagtgacaaaaaacgctgaggctatgtttataaagaatatgagaaa
agattaaaagaattaaatagtttagattttaatgatttaattttatttacccaccgttta
ttttcttatcataaagacattttggcgaaatgacaagatcgttttgattatttattagtt
gatgaatttcaagatacgaatgatttacaatttgatattatcaaatgattatcagaaaca
aagcaaaacattactgtggttggtgatcctgaccagactatttattcatggcggggagct
aaaattcgcttaattttaaattttgaacattattttaaagaaacccaaaccattatttta
gatgaaaactatcgttctagtcaaaatattttatccctcgccaatgatttaattgttaat
aataccaatcgcattaaaaaagaattgtttactagtaaagaattaggtgtcaaaccaatt
ttataccatgcgagcagtagtttagatgaaagtgattttattgccagcaaaattatccaa
ctggtgaaaaaagaggactaccattaccaagatattttaatcttataccgtgctaactat
ttatctcgtgatattgaaggttcccttgctgattatgggatttcttatcgaatttatggg
gcctttaaattttacgaacggaaagaaattaaggatgccttagcattattaaaattagta
gttaataatgaagaacttgctttagaccgggtgctattatttactcctaaaattgggcca
aaagccgttgagcaggtgaaagcaattctcaaagaacaccaggtaacttttagccaatta
ttacttgagcattttgatttattaccaaatagtttaaaaaataatttaacggcgcttagc
gaagcaatttttagtgttaatagtttattacaagacactcaaagtgttaaaatagttatt
gaaaccctactagaaaaatcaggttatttaaaacgtcttgaagataatttagaaactgaa
cgcgtagaaaatattaaagaattaattgatggaattgctaaatttgacttccaaaatgct
gacttgcaaggtcttgaattagttaatgaatacttacaattaattagtttacaaaccgac
catgataatgatgaaattaatgatgatagtgtttcattaatgacaattcataatgcgaaa
ggtttagaaaataaagttgtttttattgttggtcttaatgaaggaatttttccttcaatc
caagcgattaaaagtggtgaaagtgagttagaagaagagcgtcgaactttatatgttgca
atcacgagagcaagagaacttttatttattagttacgccgatggttattcatatgttacc
ggaaatgaaagatttccttcgcgttttgttaaagagttaaatccggactttttagaaaca
attgaaagtgatttattaggaacaactgttaagtataaaagtaattatagtttagatggg
gaatgagaaaatagtttaagtaatttttcaaataatgctcttaacacaagttcacaacct
tcccatgaaaattgatccattgatgatagtgttagtcatgaaatttttggaattggggtt
gttgtgaaaaaaatcggagctaacattcaagttatttttcctagtccgattggttcaaaa
attatttcagcggatagtaaagctattaagaaagttaagaattag
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