Spiroplasma eriocheiris: SERIO_v1c05310
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Entry
SERIO_v1c05310 CDS
T03974
Symbol
topG
Name
(GenBank) reverse gyrase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
seri
Spiroplasma eriocheiris
Brite
KEGG Orthology (KO) [BR:
seri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seri03032
]
SERIO_v1c05310 (topG)
03400 DNA repair and recombination proteins [BR:
seri03400
]
SERIO_v1c05310 (topG)
Enzymes [BR:
seri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SERIO_v1c05310 (topG)
DNA replication proteins [BR:
seri03032
]
Prokaryotic type
DNA Topoisomerases
SERIO_v1c05310 (topG)
DNA repair and recombination proteins [BR:
seri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SERIO_v1c05310 (topG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Toprim_4
Toprim_2
O-FucT
Motif
Other DBs
NCBI-ProteinID:
AKM54105
UniProt:
A0A0H3XI39
LinkDB
All DBs
Position
565277..566941
Genome browser
AA seq
554 aa
AA seq
DB search
MAKILVIMEAPAKAKKVQSFLGKDYIVWATGGHLRELKTDGDYYLGIDLETMKPRYQPIS
DRVEIINKLKEFANTAEQVYLATDPDREGEAIAYSLQELLRCKSKSYRLIFNEITEPAVI
NAIANKTKVDMNLVKAQETRRILDRLLGFRLSNLLKVKIDSKSAGRVQSVALKLIVKRYF
EHQNFKPVEYWNLYGLHRQDQFELTKINNNKVEKTISSQQMVNNIITDLAPTSKIINIIR
KPSKSKGVSPLITSTVLQKANSKYDYPTETVTKILQTLYEQGIISYPRTDSTRLNDDFIR
IAQTYLTNKFGPEYLLTTTKKQKSKLNVQDAHEAIRPTNLKHDLIWAKEHLPKEQYNIYK
LIWEYTLGSLMAPALIDRTIVTILNKDKYEFTLATGIISFMGVKKLIDDKAEDEEELLTS
NNTYQIGSEIKFDEILPKQSFTKPEPLFTEASLIKVLEELGIGRPATYATIFKILRTREY
VTLNKKAYEPTAQGIKTIDYLEKAYQSIIDEYYTANMEKVLDQIAEGKLDSKDYLIDFWL
TFNKKIKQLFRDRF
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaatattagtaattatggaggctcccgccaaagctaaaaaagtccaaagtttt
ttaggaaaagattatattgtttgagcaaccggaggacatttacgagaattaaaaactgat
ggtgactattatttgggaattgatttagaaactatgaagccaagatatcaaccaatttca
gaccgggttgagattatcaacaagttaaaagagtttgcaaacactgccgaacaagtttat
ttagcaactgaccccgaccgggaaggagaagctattgcctatagtttgcaagaactttta
cggtgcaaatcaaagagttatcggttaatttttaatgaaattaccgagccggcagttatc
aatgcgattgctaataaaacaaaagttgatatgaatcttgttaaagcccaagaaacacga
aggatcttagatcgattattaggttttcggttgtctaatttattaaaagtaaaaattgat
tccaaatcagctggtcgggtacaatcagtggctttaaaattaattgtcaagcgttatttt
gaacatcagaattttaaaccagtcgaatattgaaatctttatggacttcatcgccaagat
caatttgaactaacaaagattaataataataaagtagaaaaaacaatttcttctcaacaa
atggtgaataatattattactgatctcgctcccactagtaaaattattaatattattcgg
aagccatcaaaaagtaagggagttagtcccttaatcacttcgacagttttacagaaagca
aatagtaaatatgactatcctactgaaacggtaactaaaatcttacagactttatatgaa
caaggaataatttcttacccccgaacggattcaacccggttaaatgatgattttattaga
atagcccaaacttatttaacaaataaatttggaccagaatatttattaacaacaactaaa
aaacaaaaaagtaagttaaatgtccaggatgcccatgaagcaatccgaccaactaattta
aagcatgatttaatttgagccaaagaacatttgccaaaagaacaatataatatttataaa
ttaatttgagaatataccttaggatcattaatggcgccggcactaatcgatcgtacaata
gttactattcttaataaagataagtatgaatttactttagcaaccggaattatttctttt
atgggagttaaaaaattaatagatgataaagcagaagatgaagaagaattattaactagt
aataatacttatcaaattgggagtgaaattaaatttgatgaaattttgccaaaacaatca
tttacgaaaccagaaccattatttactgaagcaagtttaattaaagttttagaggaactt
gggattggccgtccggctacctatgcaaccatttttaaaattttgcgaactcgtgaatat
gttaccttaaacaaaaaagcttatgaaccaactgcacaagggattaaaaccattgattat
ttagaaaaagcatatcaaagtattattgatgaatactatactgctaatatggaaaaggta
ttagaccaaattgcggaaggaaaattagattctaaagattatttaattgatttttggtta
acatttaataaaaaaattaaacaattatttcgtgaccgcttttaa
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