Spiroplasma eriocheiris: SERIO_v1c06910
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Entry
SERIO_v1c06910 CDS
T03974
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
seri
Spiroplasma eriocheiris
Pathway
seri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SERIO_v1c06910 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seri03400
]
SERIO_v1c06910 (recD)
Enzymes [BR:
seri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SERIO_v1c06910 (recD)
DNA repair and recombination proteins [BR:
seri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SERIO_v1c06910 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
SH3_13
AAA_11
UvrD_C_2
Viral_helicase1
OB_YrrC
HHH_RecD2
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_24
Helicase_RecD
AAA_29
nSTAND3
AAA_5
HHH_5
AAA_12
ResIII
AAA
AAA_16
TrwB_AAD_bind
PhoH
LD_cluster3
AAA_28
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
AKM54256
UniProt:
A0A0H3XK56
LinkDB
All DBs
Position
complement(748156..750300)
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AA seq
714 aa
AA seq
DB search
MEVIRGYLKLIVFEAKNGYRICKFQLEKDKSHFIFIKGFLSSLQPDHLYELTGEFVTLEK
YGQNFEVKKIVKIEPQGQDEVLRYLASDLFPTIGPKTAQTIIDYYEDNVISKIKADFDSL
YNVPGLTPKQIAIIKDTFANMNKDDELIHFFNSNNLSLQVLSLLKTKYDVDQITAIFAKD
PYSLLLKDNISFKTIDKIYLTFTKTPTSNIRIGYYAWYYAKEFCNTTGDTYLDLSTLSKI
LEKHLSELTKEIILAGLMFAKQIGILIFKDEKIYVSDIYHSELDIAHMLVNLNQPTNFTQ
ERISELLTSFNHGVIYNAQQEKALRLGLTTNFLTIIGGPGTGKTTVVDGIVRLLRRAYPQ
DKIILAAPTGKAAKRLREKTNQKAVTIHKMLKYDPVVKQFFYNSANPLEYDILIIDEVSM
VDSLLLAAIAKASLKLKKLILIGDPNQLPSVACGDVLQDIIQSDVFDVVKLDEVYRQTEG
NDILELSYAIQNDNFDYNLFNKADVKFYENTEPQEILRQIKNKYQEILAQEDNDHHQIQV
LSPMYNGNLGINILNEYLQANLNPDYGQPTCKVGHRLFKVGDKVMQLKNRPDLEIYNGDV
GIIVDIKKDQNLNPVILVEYDENIVEYNKELYYDITLAYACSVHKLQGSEYNHILFVITR
SFWIMLQRNLIYTAISRAKHQLYLFGDSQAFIYGVNNLPKKRKTTLTETIKKFY
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaattcgggggtatttaaaactaattgtttttgaagccaagaatggttatcgg
atttgtaaatttcagttagaaaaggataaatcacattttatttttattaaaggtttttta
agtagtttacaacctgatcatttatatgaactaactggtgaatttgtaacattagaaaaa
tatggtcaaaactttgaagttaaaaaaattgttaagattgaaccgcaaggacaagatgaa
gttttacgctatttagctagtgatttatttccgaccattggtccgaaaactgcccaaact
attattgattattacgaagacaatgtgattagcaaaatcaaagcggattttgatagtttg
tacaatgttccgggattaacacccaaacaaattgccattattaaagatacttttgctaat
atgaacaaagatgatgagttaatccatttttttaatagtaataacttatcattacaagtg
ctatccttattaaaaacaaagtatgatgttgatcagattacagcaatctttgccaaagat
ccttattcattattattaaaagataatattagttttaaaacaattgataagatttattta
acttttacaaaaactccaacctcaaatatccgaatcggttattatgcatggtattatgcg
aaagaattttgtaacacaactggtgacacttatcttgacttatcaaccttatcaaaaatt
ttggaaaaacatttatccgaactaaccaaggaaattattttagcggggttaatgtttgct
aaacaaattgggattttaatttttaaggatgaaaaaatttatgttagtgatatttaccat
agtgaacttgatattgcacacatgttagttaatttaaaccaaccaactaattttacccag
gaacggattagtgaattattaactagttttaaccatggggtaatttataatgcccaacaa
gaaaaagcattacggctaggtttaactactaactttttaactattattgggggaccagga
acggggaaaaccacagtggtcgatggcattgtgcgtttattacgtcgtgcttatccccag
gataaaattattcttgccgcaccgacgggaaaagccgccaaacggttacgtgaaaaaact
aatcaaaaagcagtgacaattcataaaatgttaaagtatgaccccgtcgttaaacagttt
ttttataacagtgctaacccattagaatatgatattttaattattgatgaagtaagtatg
gttgatagtttattattagcagccattgccaaagctagtttaaagttaaaaaaattaatt
ttaattggtgatcccaaccagcttccatcagttgcttgtggtgatgtcttacaagatatt
attcaaagcgatgtttttgatgttgttaaattagatgaagtttatcgtcagactgaggga
aatgatattttagaactaagttatgccattcaaaatgataattttgactataacttgttt
aataaagcggatgttaaattttatgaaaatactgagccccaagaaatccttcgccaaatt
aaaaataagtaccaagaaattttagcgcaagaagataatgatcaccatcaaattcaagtt
ttatcaccaatgtataatggtaacttaggaattaatattttaaatgaatatctccaagca
aatttaaatccggattatgggcaaccaacatgcaaggttgggcaccggctttttaaagtt
ggtgataaggtaatgcagttaaaaaaccgaccagatttagaaatttataacggagatgtt
ggtattattgttgatattaaaaaagaccagaatttaaacccggtcatcttagttgaatat
gatgaaaatattgttgaatataataaagaactatattatgatattaccttagcctatgct
tgtagtgttcacaaattacaaggtagtgaatataaccatattttgtttgttataacccgc
tctttttgaattatgctacagcgcaatttaatttatacagccatttcccgtgctaaacat
caattatatttatttggggatagccaggcctttatttatggtgtaaataatttaccaaaa
aaacgaaaaacaactttaactgaaaccattaagaaattttattaa
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