Serinicoccus hydrothermalis: SGUI_0865
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Entry
SGUI_0865 CDS
T04436
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03030
DNA replication
serj03430
Mismatch repair
serj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGUI_0865
03430 Mismatch repair
SGUI_0865
03440 Homologous recombination
SGUI_0865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serj03032
]
SGUI_0865
03400 DNA repair and recombination proteins [BR:
serj03400
]
SGUI_0865
Enzymes [BR:
serj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGUI_0865
DNA replication proteins [BR:
serj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGUI_0865
DNA repair and recombination proteins [BR:
serj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGUI_0865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Intein_splicing
tRNA_anti-codon
HHH_3
DNA_pol_IIIA_C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ANS78261
UniProt:
A0A1B1NA32
LinkDB
All DBs
Position
complement(939000..943112)
Genome browser
AA seq
1370 aa
AA seq
DB search
MSSPASPAQNFVHLHNHTEYSMLDGAARITDMFEKAAELGMPAIATTDHGFIFGAYEFWK
TAQRYDVKPIVGLEAYVTPGTHRTDKTRVKYGDGGRDDVSGGGAYTHMTLLARNNNGMHN
LFRMASLASMEGYYFKPRMDRELLETYGQGLIATTGCPSGEIQTRLRLGQWDKAVQYASD
MKDIFGADNYFLELMDHGIQIERVVRQDLLRLAKELSLPLLATNDLHYTHQEDAKAHSAL
LCVQSGSTMQDPNRFQFNGDGYYLKSAAEMREVWRELPEACDNTLLVADRCDISFTEGEG
RYMPRFPVPEGEDETSWFIKEVESGLHKRFPEGVPDYARKQAEYESGVIIDKQYPGYFLV
VADFINWAKDNGIKVGPGRGSGAGSMCAYAMGITDLDPIPHGLIFERFLNPERKSMPDFD
VDFDDRRRSEVIRYVTEKYGDERVAMIVTYGTIKAKQALKDASRVMGFPFAMGEKLTKAM
PPTVMGKDISLAGIQDPQDKRYAEAGEFREMLADDEHAAEVFDTATGLEGLKRQWGVHAA
GVIMSSEPLIDVIPIMRRDQDGQIITQFDYPTCESLGLVKMDFLGLRNLTVLDDAIHNIK
DNRGQDIDLDALSKDMSDRKTYDLLGRGDTLGVFQLDGNGMRQLLRLMQPDTFEDISAAL
ALYRPGPMGVNAHTNFALRKNGKQENTPLDPELKGKLQPEMEAALEPILGNTYGLCVAGD
TPIIDADTGESVRVDDLERRVREGFFTFGVDERGKVVRRRVTHWWQMPDKPVLTVSTDLG
ERLRLSADHPVLTGRGWVQAGDLVVGDDRIAWTDDERVWVGRSERVLVGATTGRESGHSS
PSAPAPGGRDEQLGWTRVTEVSVGPAEPVYDITVDDVHNFVSSGMVLSNCIYQEQVMEIA
QKLAGYTLGNADLLRRAMGKKKKEVLDAEYIPFSDGMKANGYNEASVAALWGVLVPFSDY
AFNKAHTAAYGVISYWTGYLKANYPAEYMAALLTSVGDDKDKTALYLAECRRLGIPVLPP
DVNESIGTFAAVEDDIRFGLQAIRNVGANVVQAIVATREEKGAFTSFEDFLRKCPAVVCN
KRTIESLCKAGAFDSLGHTRQGLVTVHERYVEALADEKKQEAIGQDSLFSGLSFGGGGDD
ADEGAGIQIVTLPPIPAIEWDKTARLAFEREMLGLYVSDHPLNGIEHILSQHASASILQL
VGEDGAKDGDFVTVAGLITNLQLKRTKNGDPYARASVEDMAGSLDVVFWPKTYMTISTML
AEDTVVVVKGRLKKDDSTELMANEMTLPDIKAGPRGPVVLNLPLTRVTDGLAHRLKTVLA
DHPGATDVHVKLTQPGRTVLLKLDESLRVTATPELFGDLKALLGPASVGN
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccagccagccccgcgcagaacttcgtccacctgcacaaccacaccgagtac
tccatgctcgacggtgcggcgcggatcaccgacatgttcgagaaggccgccgagctgggg
atgccggcgatcgccaccaccgaccacggcttcatcttcggcgcctacgagttctggaag
accgcccagcgctacgacgtcaagccgatcgtcgggctggaggcctacgtcacccccggc
acgcaccgcaccgacaagacgcgggtgaagtacggcgacggcggcagggacgacgtctct
ggcggcggggcatacacccacatgacgctgctggcgcgcaacaacaacggcatgcacaac
ctcttccggatggcctcgctggcctcgatggagggctactacttcaagccgcggatggac
cgtgagctgctggagacctacggccaggggctcatcgccacgaccgggtgtccgtcgggg
gagatccagacccggctgcgcctcgggcagtgggacaaggcggtgcagtacgcctcggac
atgaaggacatcttcggggcggacaactacttcctcgagctcatggaccacggcatccag
atcgagcgggtggtgcgccaggacctgctccggctggccaaggagctctcgctgccgctg
ctggcgaccaacgacctgcactacacccaccaggaggacgccaaggcgcactccgcgctg
ctgtgcgtgcagtccggctcgacgatgcaggacccgaaccggttccagttcaacggcgac
ggctactacctcaagtccgccgcggagatgcgcgaggtatggcgcgagctgcccgaggcc
tgcgacaacaccctcctcgtcgccgaccgctgcgacatctccttcaccgagggcgagggg
cgctacatgccccgcttcccggtgcccgagggcgaggacgagacgagctggttcatcaag
gaggtcgagtccgggctgcacaagcggttcccggagggggtccccgactacgcccgcaag
caggcggagtacgagtcgggcgtcatcatcgacaagcagtacccgggctacttcctcgtc
gtggccgacttcatcaactgggccaaggacaacggcatcaaggtcggccccgggcgcggg
tcgggcgccgggtcgatgtgcgcctacgccatggggatcaccgacctcgaccccatcccg
cacggcctcatcttcgagcgcttcctcaaccccgagcgcaagtcgatgcccgacttcgac
gtcgacttcgacgaccggcgccgctccgaggtcatccgctacgtcaccgagaagtacggc
gacgagcgggtcgccatgatcgtcacctacggcacgatcaaggccaagcaggcgctcaag
gacgcctcccgcgtcatgggcttcccgttcgccatgggggagaagctcaccaaggccatg
ccgcccaccgtcatgggcaaggacatctcgctggcggggatccaggacccgcaggacaag
aggtatgccgaggccggcgagttccgcgagatgctcgccgacgacgagcacgcggccgag
gtcttcgacacggcgaccgggctcgaggggctgaagcgccagtggggcgtgcacgcggcc
ggcgtcatcatgtccagcgagccgctcatcgacgtcatcccgatcatgcgccgcgaccag
gacgggcagatcatcacccagttcgactacccgacgtgcgagtcgctgggcctggtcaag
atggacttcctcgggctgcgcaacctcacggtcctggacgacgcgatccacaacatcaag
gacaaccgcggccaggacatcgacctggacgcgctgtccaaggacatgagcgaccgcaag
acctacgacctgctcggacgcggcgacaccctcggtgtcttccagctcgacggcaacggc
atgcgccagctgctccggctcatgcagccggacaccttcgaggacatctccgcggcgctc
gcgctctaccgccccggccccatgggcgtcaacgcgcacaccaacttcgccctgcgcaag
aacggcaagcaggagaacaccccgctcgaccccgagctcaagggcaagctgcagccggag
atggaggcggccctcgagccgatcctcggcaacacttacggtttgtgcgtcgcgggcgat
accccgatcatcgatgccgacaccggggagagcgttcgtgtcgacgacctggagcgccgg
gtgcgggagggcttcttcaccttcggcgtggacgagcgcggcaaggtcgtgcgtcgacgc
gtgacccactggtggcagatgccggacaagccggtcctgacggtgagcacggatctgggc
gagcgcctccgcctgtcggccgaccaccccgtgctgaccgggcgtggctgggtccaggcc
ggtgacctcgtggtgggagacgaccggatcgcgtggactgacgacgaacgggtctgggtc
ggtcgttccgagagggtcctcgtcggcgccacgaccggtcgtgagtctgggcactcctcg
ccgtctgcgcccgctccgggtggacgcgacgaacagctgggctggaccagggtcaccgag
gtctcggtgggccctgcggagccggtctacgacatcaccgtcgacgacgtgcacaacttc
gtctccagcgggatggtcctctccaactgcatctaccaggagcaggtcatggagatcgcg
cagaagctcgcgggctacaccctgggcaacgccgacctgctccggcgcgcgatgggcaag
aagaagaaggaggtgctcgacgccgagtacatccccttctccgacggcatgaaggccaac
ggctacaacgaggcctcggtcgcggcgctctggggcgtcctcgtgcccttctccgactac
gccttcaacaaggcgcacaccgcggcctacggcgtcatctcctactggaccggctacctc
aaggccaactacccggccgagtacatggcggccctgctcaccagcgtcggcgacgacaag
gacaagaccgcgctctacctcgccgagtgccggcggctggggatcccggtgctgccgccg
gacgtcaacgagtcgatcggcaccttcgccgcggtcgaggacgacatccgcttcggcctg
caggcgatccgcaacgtgggcgccaacgtggtccaggcgatcgtcgcgacccgggaggag
aagggcgccttcacctccttcgaggacttcctgcgcaagtgcccggcggtggtctgcaac
aagcgcaccatcgagtcgctgtgcaaggccggcgccttcgacagcctcgggcacacccgc
cagggcctggtcaccgtgcacgagcggtatgtcgaggcgctcgcggacgagaagaagcag
gaggccatcggccaggacagcctcttctccgggctctccttcggcggcggcggcgacgac
gcggacgagggcgccgggatccagatcgtcaccctgcccccgatccccgcgatcgagtgg
gacaagaccgcgcggctggccttcgagcgggagatgctcggcctctacgtctccgaccac
ccgctcaacggcatcgagcacatcctgtcccagcacgcgagcgcctcgatcctgcagctc
gtcggggaggacggcgccaaggacggcgacttcgtcaccgtcgccgggctcatcaccaac
ctgcagctcaagcgcaccaagaacggcgacccgtatgcccgcgcctcggtcgaggacatg
gccggctcgctcgacgtggtcttctggcccaagacctacatgacgatctcgacgatgctc
gccgaggacaccgtcgtcgtggtcaagggacggctgaagaaggacgactcgaccgagctc
atggccaacgagatgaccctgccggacatcaaggccggtccccgcggtcccgtcgtgctc
aacctgccgctgacccgcgtcacggacgggctggcgcaccgcctcaagacggtgctggcc
gaccaccctggcgccaccgacgtccacgtcaagctcacccagcccggccggaccgtcctg
ctcaagctggacgagagcctgcgggtcaccgcgacccccgagctcttcggcgacctcaag
gcgctgctcggcccggccagcgtcggcaactag
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