Serinicoccus hydrothermalis: SGUI_0910
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Entry
SGUI_0910 CDS
T04436
Name
(GenBank) ATP-dependent helicase hrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
serj
Serinicoccus hydrothermalis
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serj03019
]
SGUI_0910
Enzymes [BR:
serj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SGUI_0910
Messenger RNA biogenesis [BR:
serj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SGUI_0910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
nSTAND3
AAA_16
NACHT
T2SSE
AAA_30
SLFN-g3_helicase
PhoH
ABC_tran
NTPase_1
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ANS78306
UniProt:
A0A1B1NA57
LinkDB
All DBs
Position
complement(995919..999959)
Genome browser
AA seq
1346 aa
AA seq
DB search
MPGPDRRDRKDGTGRRRGRRGQSRSPRGTDAAAAAAARREAQPKPGSLHYPPELPVSERR
EDLLRAVADHQVVVVAGETGSGKTTQLPKICLELGRGVEGMIGHTQPRRIAARSVAERVS
EELGAELGTVVGYQVRFTDVSRADTLVKVMTDGILLSELQRDRDLRRYDTLIIDEAHERS
LNIDFILGYLRRLLPRRPDLKVIITSATIDVERFAAFFADEQGRPAPVIEVSGRTYPVEV
RYRPLTREEPGRRGGADAEPREVEIDQVTGVVEAVEELWTEDTGRDGLGEDVLVFCSGER
EIRDVCDALGGLDLPGTEVLPLYGRLSAAEQHRVFSRHTGRRIVVSTNVAETSLTVPGIR
YVVDTGTARISRYSQRLKVQRLPIEPISQASANQRAGRCGRLADGIAIRLYSEEDFAGRP
EFTDPEILRTNLASVILQMTNLGLGEIEKFGFLEPPDSRQVADGVRLLTELQAIDPKAPA
HLPRKRLTPYGRAIVGLPVDPRLARMLIEAERQGALKEVLVVVAALSMQDVRERPSDRQQ
QADQAHARFRRTGGAQGPPNPHRPAPDDKGDKDVVDSDFLVILNLWRYLQRQQKQLSGSA
FRRMCKAEFLHYLRVREWQDLHTQLRRAVKQLGMELNQHPANSDQVHSSLLTGLLSNVGM
WEREARAYLGARNARFVIQPGSVLHRKNPDWVMSAELVETTRLWARTNAVIDPAEVERAA
AHLVKRSYSEPRWSRSAGSAVADERVTLYGIPLVAGRAVPLGRIDPETARDLFIRQGLVE
EDWETRHEFFHANRRLVRELGQLEERARRRDILVDDETLVEFYSARIPAEVVSGTHFDTW
WKTARREDPQLLTFTEDLLVGDAGDRVSGLTDDFPTQWRQGELTFGLTYQFEPGADADGV
TAHLPVEVLNQVQEDGFDWLVPGMHEELVTALVKALPKDVRRNFVPAPDHARAALRGMRE
AGVVGRVPVREALADELTGRGLARVDPGDMAWERVPDHLRMTFRVERAARPGKGRNRRRG
RAEVLGEGKDLASLQEELAPAVRSSMAAAASGVERTGLTAWPADLDPLPETFSRQVGPRE
VQGYPALVDTGDAVDVRVLATRSEADRETRRGVRRLLLLGTTPPWKRLLALLSNQQKLSL
GHNPHGSVPALLEDALAAAVDSVVAEQPGATVRTPSQFEAALVGVRQQTVPRVLEIVESL
VPILDTAREVSLRLQRLDAPAAADLATDLRRQLDALVRPGFVTDVGYARLPRMVVWLRGM
AERLDKGVEDLNRDRQRREDVGVVESELASFLDGLPPHRRGDPDVRDVVWSLQELRVSLF
AQRLGTPAPVSPKRIYAAMDRAEAAG
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgggccagatcgacgtgaccgcaaggacggcaccggtcgtcggcgcggcaggcgg
gggcagagccggtcgccgaggggcaccgacgccgccgcggcggccgcggcgcgtcgggag
gcgcagcccaagcccggctcgctgcactacccgcccgagctgcccgtctccgagcgccgc
gaggacctgctgcgcgcggtcgccgaccaccaggtggtcgtcgtcgcgggggagaccggc
tctggtaagaccacccagctgccgaagatctgcctggagctgggacgcggcgtcgagggc
atgatcgggcatacccagccgcgccggatcgccgcccggtcggtggccgagcgggtgagc
gaggagctgggcgccgagctgggcaccgtcgtgggctaccaggtgcgcttcaccgacgtc
tcccgcgccgacaccctcgtcaaggtcatgaccgacggcatcctgctctccgagctgcag
cgggaccgggacctgcgccgctacgacaccctcatcatcgacgaggcgcacgagcgcagc
ctcaacatcgacttcatcctgggctacctgcgccggctgctgccgcgccggccagacctc
aaggtcatcatcacctcggccaccatcgacgtcgagcgcttcgcggccttcttcgccgac
gagcaggggcggccggcaccggtcatcgaggtctccgggcgcacctacccggtcgaggtc
cgctaccggccgctcacccgtgaggagcccggcaggcgcggcggggccgacgccgagccc
cgggaggtcgagatcgaccaggtcaccggcgtcgtcgaggcggtcgaggagctgtggacc
gaggacaccgggcgcgacggcctcggcgaggacgtgctcgtcttctgctccggcgagcgg
gagatccgcgacgtgtgcgacgcgctcggcgggctggaccttcccggcaccgaggtcctg
ccgctctacggccggctctccgcggccgagcagcaccgggtcttctcgcggcataccggg
cgccgcatcgtcgtgtcgaccaacgtcgccgagacctcgctcaccgtccccgggatccgg
tatgtcgtggacaccggcaccgcgcggatcagccgctacagccagcggctcaaggtgcaa
cggctgccgatcgagccgatcagccaggcgtcggcgaatcagcgggccgggcgctgcggg
cgcctcgccgacggcatcgcgatccggctctacagcgaggaggacttcgcgggccggccc
gagttcaccgaccccgagatcctgcggaccaacctggccagcgtcatcctgcagatgacc
aacctgggcctgggggagatcgagaagttcggcttcctcgagccgccggactcgcggcag
gtcgccgacggcgtccggctgctcaccgagctgcaggccatcgaccccaaggcgcccgcg
cacctgccacgcaagcgcctcaccccctacggccgggccatcgtcggcctgccggtcgac
ccccggctcgcccggatgctcatcgaggccgagcggcagggggcgctcaaggaggtgctc
gtcgtcgtcgcggcgctgtccatgcaggacgtccgcgagcgtccgtccgaccggcagcag
caggccgaccaggcgcacgcccgcttccgccgcaccggtggggcccagggcccgccgaac
ccccaccggccggcaccggacgacaagggcgacaaggacgtcgtcgacagcgacttcctc
gtcatcctcaacctctggcgctacctccagcggcagcagaagcagctctccggcagcgcc
ttccggcgcatgtgcaaggccgagttcctgcactacctgcgggtgcgggagtggcaggac
ctgcacacgcagctgcggcgggcggtcaagcagctcgggatggagctcaaccagcacccg
gcgaacagcgaccaggtgcactcctccctgctcaccgggctgctgtccaacgtggggatg
tgggagcgggaggcacgggcatacctcggcgcccgcaacgcccgcttcgtcatccagccc
ggctcggtgctgcaccgcaagaaccccgactgggtcatgagcgccgagctcgtcgagacc
acccggctgtgggcccgcaccaacgccgtcatcgacccggccgaggtggagcgggccgcc
gcgcacctcgtcaagcggtcctacagcgagccccgctggtcgcgctcggccgggtcggcg
gtcgcggacgagcgggtgacgctctacggcatacccctcgtcgcgggacgtgcggtgccg
ctggggcggatcgacccggagaccgcgcgtgacctcttcatccggcaggggctggtcgag
gaggactgggagacgcggcacgagttcttccacgccaaccggcggctggtgcgcgagctg
ggccagctcgaggagcgcgcgcggcgccgcgacatcctcgtcgacgacgagacgctcgtg
gagttctactccgcgcggatcccggccgaggtggtgtccggcacgcacttcgacacctgg
tggaagaccgcgcggcgcgaggacccgcagctgctgaccttcaccgaggacctgctcgtg
ggcgacgccggcgaccgggtgagcgggctcaccgacgacttcccgacgcagtggcgccag
ggcgagctgaccttcgggctgacctaccagttcgagccgggcgcggacgccgacggggtg
accgcgcacctgcccgtcgaggtgctcaaccaggtgcaggaggacggcttcgactggctc
gtgcccgggatgcacgaggagctggtcacggcgctggtcaaggcgctgcccaaggacgtg
cgccgcaacttcgtgccggcgccggaccacgcgcgcgccgcgctgcggggtatgcgcgag
gccggggtcgtcggccgggtgccggtccgggaggcgctggcggacgagctcaccggccgc
ggtctggcgcgggtggacccgggggacatggcctgggagcgggtgccggaccacctgcgg
atgaccttccgggtggagcgcgccgcccggccgggcaagggccggaaccgacgtcgcggc
cgcgccgaggtgctgggcgagggcaaggacctcgcctcgctgcaggaggagctggcaccc
gcggtgcgcagctcgatggccgccgcggcctcgggggtggagcggaccgggctgacggcg
tggcccgccgacctggacccgctgcccgagacgttcagccgccaggtcgggccgcgtgag
gtccagggctacccggcgctggtcgacaccggtgacgcggtggacgtgcgcgtgctggcg
acccgctccgaggcggaccgggagacgcggcgcggggtgcggcggctgctgctgctcggc
acgacgccgccgtggaagcggctgctggcgctgctgtccaaccagcagaagctgtcgctg
ggccacaacccgcacggctcggtgcccgcgctgctcgaggacgcgctggctgcggcggtc
gactcggtcgtggcggagcagccgggggccacggtccgcacaccctcgcagttcgaggcg
gccctggtcggggtccgccagcagaccgtgccgcgggtgctggagatcgtggagtcgctc
gtgccgatcctcgacacggcgcgcgaggtgtcgctgcggctgcagcggctggacgcgccg
gccgccgcggacctcgccaccgacctgcggcgccagctggacgcgctcgtgcggcccggc
ttcgttaccgacgtcgggtatgcccggctcccgcggatggtggtgtggctgcgcgggatg
gccgagcggctggacaagggcgtggaggacctgaaccgcgaccggcagcgcagggaggac
gtcggtgtcgtcgagtccgagctcgcgtccttcctcgacgggctgccgccgcaccgccgg
ggcgacccggacgtccgggacgtcgtgtggtccctgcaggagctgcgggtctccctcttc
gcccagcgcctcggcacgcctgccccggtctcgcccaagcggatctacgccgcgatggac
cgcgccgaggcggccgggtga
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