Serinicoccus hydrothermalis: SGUI_0960
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Entry
SGUI_0960 CDS
T04436
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGUI_0960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serj03019
]
SGUI_0960
03400 DNA repair and recombination proteins [BR:
serj03400
]
SGUI_0960
Enzymes [BR:
serj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SGUI_0960
Messenger RNA biogenesis [BR:
serj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SGUI_0960
DNA repair and recombination proteins [BR:
serj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SGUI_0960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Cas3-like_C_2
HEM4
Pribosyltran
B12-binding
AAA_22
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
ANS78356
UniProt:
A0A1B1NAA2
LinkDB
All DBs
Position
complement(1062314..1064518)
Genome browser
AA seq
734 aa
AA seq
DB search
MAWGVGGEHYGRGMPDVMQETTSLAEGARAALRRLVGREDADFRDGQLEAVRALVEDRAR
VLVVQRTGWGKSAVYFVATALRRQQGAGPTVIVSPLLALMRDQIAAAGRAGVRAVTMNSA
NATEWDDVRSALAADEVDVLLVSPERLNNPRFREEQLPDLAARCGLLVVDEAHCISDWGH
DFRPDYRRIRNLLDALPEGTPVLATTATANERVVDDVVEQLGVGGATVRTIRGPLARASL
RLGVLPRLAPDQRLGWLLAHLGTLPGSGIIYCLTVSAAQDVAEALRAAGHEVAAYTGRTD
TEDRERLEAALRDNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRAT
ERADVLLLPGSEDRDIWNYFATVSMPRQDQADAVLTALAESDRPLSTPALETIVDVRRTR
LELLLKVLDVDGAVGKVPGGWTATGRPWVYDKERYTRVAEARVREAELMVAYQQTEGCRM
AFLQECLDDATAQPCGRCDRCAGAWFPEEIPQEAVGSARERLGAVGVPIDPRAQWPTGMP
RLGVEVKGKIPTEEQAAEGRALTRLSDLGWGQRLRAVLEAGTSRVSDDPDGETTVGSPVP
EEVTRAVVQVLSGWGWAQRPEGVVAMPSRRRPAVVGSLAEQISQIGRLPLLGTLDLAHGG
PVGEPGGNSAFRLANVWDRVVVGPELREALSGVRGPVLLVDDVVDSRWTMTVAARALRRA
GVEAVLPLALAIEG
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtggggtgtcggaggtgagcactacggtcgaggtatgccggatgtgatgcaggag
acgacctcgctggccgagggtgcccgcgccgcgctgcggcggctcgtggggcgggaggac
gcggacttccgggacgggcagctcgaggcggtgcgcgccctcgtcgaggaccgcgcccgg
gtgctggtggtgcagcggaccgggtggggcaagtcggcggtctacttcgtggccaccgcg
ctgcggcggcagcagggcgccgggccgacggtcatcgtgtcgccgctgctggctctgatg
cgcgaccagatcgcggcggccgggcgagccggcgtgcgcgccgtgacgatgaactcggcc
aacgccaccgagtgggacgacgttcggtccgcgctcgccgccgacgaggtggacgtgctg
ctcgtgagcccggagcggctcaacaacccgcgcttccgggaggagcagctgcccgacctg
gccgcacgctgcgggctgctcgtcgtggacgaggcgcactgcatcagcgactggggtcac
gacttccggccggactaccggcgcatccgcaacctgctcgacgcgctgcccgagggcacg
cccgtgctggcgaccacggcgaccgccaacgagcgggtggtcgacgacgtcgtcgagcag
ctgggggtcggcggtgccacggtccggaccatccgggggccgttggcgcgcgcctcgctg
cggctcggcgtgctgccgcggctggcccccgaccagcggctgggctggctgctggcccac
ctgggaacgctcccgggcagcggcatcatctactgcctcacggtgtcggcggcgcaggac
gtcgcggaggcgctgcgcgccgccgggcacgaggtcgcggcatacacggggcggaccgac
accgaggaccgcgagaggctcgaggcggcgctgcgggacaaccaggtcaaggcgctcgtg
gcgaccagcgcgctcgggatgggcttcgacaagcccgacctcgggttcgtcgtccacctg
ggtgcgccgagctcgccggtggcctactaccagcaggtgggacgcgcgggccgcgcgacc
gagcgggccgacgtgctgctgctgcccggctcggaggaccgggacatctggaactacttc
gccacggtgtcgatgccgcggcaggaccaggcggacgcggtgctgaccgcgctcgccgag
agcgaccggccgctgtccacgccagcgctggagacgatcgtcgacgtgcgacgcacccgg
ctggagctgctgctcaaggtgctcgacgtcgacggggccgtggggaaggtccccggcggc
tggacggcgacgggacgtccgtgggtctacgacaaggagcgctacacccgggtcgcggag
gcgcgcgtgcgcgaggccgagctcatggtggcctaccagcagaccgagggctgccgcatg
gcgttcctgcaggagtgcctggacgacgcgacggcgcagccgtgcggccgctgcgaccgg
tgcgcgggcgcgtggttccccgaggagatcccgcaggaggcggtcgggtcggcgcgcgag
cggctcggcgcggtcggggtgccgatcgacccgcgtgcgcagtggccgaccggtatgccc
cgcctcggggtcgaggtgaagggcaagatcccaaccgaggagcaggcggccgaggggcgg
gcgctcacgcggctctccgacctcgggtgggggcaacggttgcgcgcggtgctcgaggca
gggacgtcgcgagtctcggacgacccggacggggagacgacggtgggatcgccggtgccg
gaggaggtcacccgcgcggtggtgcaggtgctgtccggctggggctgggcgcagcgcccc
gagggggtggtcgcgatgccgtcgcggcgccggccggcggtggtggggtcgctcgccgag
cagatcagccagatcggccggctgccgctgctcggcacgctcgacctggcgcacggtgga
ccagtgggcgagcccggcggcaacagcgccttccggctggccaacgtctgggaccgcgtc
gtcgtcggtccggagctgcgggaggcgttgtccggggtgcgcgggccggtgctgctcgtc
gacgacgtcgtggactcccgctggacgatgacggtcgcggcccgggcgctgcggcgggcc
ggggtggaggcggtgcttccgctcgcgctggcgatcgagggctga
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integrated database retrieval system
