Serinicoccus hydrothermalis: SGUI_1263
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Entry
SGUI_1263 CDS
T04436
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGUI_1263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serj03021
]
SGUI_1263
03019 Messenger RNA biogenesis [BR:
serj03019
]
SGUI_1263
Transcription machinery [BR:
serj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SGUI_1263
Messenger RNA biogenesis [BR:
serj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SGUI_1263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
FANC_SAP
ResIII
Motif
Other DBs
NCBI-ProteinID:
ANS78659
UniProt:
A0A1B1NB46
LinkDB
All DBs
Position
complement(1395086..1397086)
Genome browser
AA seq
666 aa
AA seq
DB search
MTEITDASATRTGALSTLRLAELQQLASGMGITVNPKMRKADLVSAIREQRGGAASTNGA
ARPPAEQDRPAEGGRPAQGRRQEGSSGQGGDAAGLEAALDRAQAEREDTETPGNGSRTRR
SRRGGAAAGAPRTAQERGGDDQDAPQQEREQRRDDRESGQDGRQDEQRDRQQGQRDRQDD
SRQQPRHGDQGQQSRQGDGQSRQGGDQGQQGDGQGQRRQGENDRDNDDDDGNRRGRRRNR
NRNRDRKRGRGGQQGGGQQGGGQQEAESYTEEDVLVPVGGVVDLLDSYAFIRTTGYLPGP
TDVYVPMGMVKRHGLRKGDAVTGVIKAPQEGNDAGQHTVSSTGNKRDKGKFSALVRLDSI
NGQEAEQARRRPEFSSLTPLYPQQRLRLETEQKNLTTRIIDLVAPIGKGQRGLLVAPAKA
GKTLILQAIANAITTNNPEVHLMVVLVDERPEEVTDMQRAVKGEVISSTFDRPASDHTTV
AELAIERAKRLVEMGGDVVVLLDSITRLGRAYNLAAPASGRILSGGVDSAALYPPKKFFG
AARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELKLDRQLANRRIFPAVDINA
SGTRREEILMSSEELKIMWKLRRVLAALDQQQGIELLIDRLKKTKHNYEFLTQVQQTSSV
RLDDED
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
gtgactgagatcaccgacgccagcgcgacccgcacgggcgcgctgagcaccctgcgcctg
gccgagctgcagcagctcgcgtccggcatgggcatcaccgtgaaccccaagatgcgcaag
gcggacctggtgtccgccatccgggagcagcgcgggggcgccgcctccaccaacggcgcg
gcgcgtccgccggccgagcaggaccgccccgccgagggtggccggccggcgcaggggcgc
cggcaggagggctcgagcggccagggcggcgacgccgccggcctggaggccgcgctggac
cgcgcacaggccgagcgcgaggacaccgagaccccgggcaacggctcccgtacccggcgc
agccgtcgcggcggtgccgccgccggcgcgccccgcaccgcgcaggagcgtggcggcgac
gaccaggacgccccccagcaggagcgcgagcagcggcgggacgaccgcgagagcgggcag
gacggccgccaggacgagcagcgcgaccggcagcagggccagcgcgaccgccaggacgac
tcccgtcagcagccccgccacggcgaccagggccagcagtcccgccagggcgacgggcag
tcccgtcagggcggcgaccagggtcagcagggcgacgggcaggggcagcgtcgtcagggc
gagaacgaccgcgacaacgacgacgacgacggcaaccgccgggggcgccgccgcaaccgc
aaccgcaaccgggaccgcaagcgcggccgtggcggccagcagggtggcggccagcagggc
gggggccagcaggaggccgagagctacaccgaggaggacgtgctcgtcccggtgggcggt
gtggtcgacctgctcgacagctacgccttcatccgtaccaccggctacctgcccggcccg
accgacgtctacgtcccgatgggcatggtcaagcggcacgggctgcgcaagggcgacgcc
gtcaccggtgtcatcaaggccccgcaggagggcaacgacgccggccagcacaccgtgtcc
tcgaccggcaacaagcgggacaagggcaagttcagcgcgctggtgcggctggacagcatc
aacggccaggaggcggagcaggcacgccgccggccggagttctccagcctcaccccgctc
tacccgcagcagcggctgcggctcgagaccgagcagaagaacctcaccacccggatcatc
gacctggtcgcccccatcggcaagggccagcgcggactgctggtggcgccggccaaggcg
ggcaagaccctgatcctgcaggccatcgccaacgcgatcaccacgaacaaccctgaggtc
cacctcatggtcgtcctcgtggacgagcgcccggaggaggtcacggacatgcagcgtgcg
gtcaagggcgaggtcatctcctcgaccttcgaccgcccggccagcgaccacacgacggtc
gccgagctggcgatcgagcgggccaagcgcctggtcgagatggggggcgacgtggtggtg
ctcctggactccatcacccgcctgggccgcgcctacaacctggcggccccggcctcgggc
cgcatcctgtccggtggtgtcgactcggccgcgctctaccccccgaagaagttcttcggc
gccgcgcgcaacatcgagaacggcggctccctgacgatcctggcgaccgctctcgtcgag
accggctccaagatggacgaggtgatcttcgaggagttcaagggcaccggcaacatggag
ctcaagctcgaccgccagctcgccaaccgccggatcttcccggcggtcgacatcaacgcc
tccggcacgcggcgcgaggagatcctcatgagctcggaggagctgaagatcatgtggaag
ctgcgccgggtcctggcggcgctcgaccagcagcagggaatcgaactgctcatcgaccgg
ttgaagaagacgaagcacaactacgagttcctcacccaggtccagcagaccagctcggtc
cggctggacgacgaggactga
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