Serinicoccus hydrothermalis: SGUI_1713
Help
Entry
SGUI_1713 CDS
T04436
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SGUI_1713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serj03400
]
SGUI_1713
Enzymes [BR:
serj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SGUI_1713
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SGUI_1713
DNA repair and recombination proteins [BR:
serj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SGUI_1713
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_8
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ANS79109
UniProt:
A0A1B1NCE6
LinkDB
All DBs
Position
complement(1888565..1889425)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVQALTDFLADRLTGRVVTDVELGSIAVLKTFDPPPTALVGAPVDAVARHGKFVD
VDVDGTHLVFHLARAGWLRWYDEMPRTQVRPGRSPIALRLRLDDGAGFDLTEAGTKKGLA
AYVVKDPGDVPGVASLGPDPLADGFDEAAFTALLGGRRTQIKGLLRDQSVLAGVGNAYSD
EILHAARLSPFALASALTPEQVSGLYTALRTTLEAAVLAAEGKPAAQLKEAKRAGMNVHG
RTGEPCRVCGDTVREVSFADSSLQYCPTCQTGGKPLADRRMSRLLR
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctgcccgaggtccaggccctcacggacttcctcgccgaccggctcaccggg
cgggtcgtcaccgacgtcgagctgggctccatcgcggtgctcaagaccttcgacccgccg
ccgaccgcgctcgtgggggcgccggtcgacgccgtggcgcggcacgggaagttcgtggac
gtcgacgtcgacgggacccacctcgtcttccacctggcccgcgccggctggctgcggtgg
tacgacgagatgccgcgcacccaggtgcgccccggccgcagcccgatcgcgctgcggttg
cgcctcgacgacggggccggcttcgacctcaccgaggcgggcacgaagaagggcctggcc
gcctacgtcgtcaaggaccccggggacgtgccgggggtggcctcgctggggccggacccc
ctggcggacggcttcgacgaggccgccttcaccgccctgctcgggggacgacggacccag
atcaaggggttgctgcgggaccagtcggtcctcgcgggggtgggcaacgcctactccgac
gagatcctgcacgccgcccggctctcgcccttcgcgctcgcgtccgccctgacccccgag
caggtgagcggtctctacaccgcgctgcgcaccacgctggaggccgcggtgctggcggcc
gagggcaagcccgcggcccagctgaaggaggccaagcgggccggcatgaacgtccacggc
cgcaccggcgagccctgccgggtgtgcggcgacacggtgcgcgaggtgtccttcgccgac
tcctcgctgcagtactgccccacctgccagaccggcggcaagccgctcgccgaccggcgc
atgtcccgcctcctgcgctga
DBGET
integrated database retrieval system
