Serinicoccus hydrothermalis: SGUI_2301
Help
Entry
SGUI_2301 CDS
T04436
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
serj
Serinicoccus hydrothermalis
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serj03016
]
SGUI_2301
Enzymes [BR:
serj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SGUI_2301
Transfer RNA biogenesis [BR:
serj03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SGUI_2301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
PKS_DE
Motif
Other DBs
NCBI-ProteinID:
ANS79697
UniProt:
A0A1B1NE33
LinkDB
All DBs
Position
2512915..2513487
Genome browser
AA seq
190 aa
AA seq
DB search
MRAFIALIPPAPVGAEIDDFLEPRQDALAPRGDWRWTRPEHRHVTLAFLPELEEWREEAL
IEEGMQWAARAQPVRLTLRGAGAFPDPGAAKVLWAAVEQADPGSLQSWAQSLRALSSRAG
ARVDGTRFSPHLTLARSVGRPRAAGHLVQALDTLHTSSWTATEVCLVRSELGQGPGGTPR
YAVRHTWSLR
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtgccttcatcgccctgatcccacccgcccccgtcggtgccgagatcgacgacttc
ctcgagccgcgtcaggacgcgctcgcgccccgcggcgactggcgctggacccgaccggag
caccggcacgtcacgctcgccttcctgcccgagctggaggagtggcgggaggaggcgctc
atcgaggagggtatgcagtgggccgcccgcgcgcagccggtgcgcctgacgctgcggggt
gccggggccttccccgacccgggtgccgcgaaggtgctctgggccgcggtcgagcaggcg
gaccccgggtccctgcagagctgggcgcagagcctgcgggcgctgtccagccgggccggc
gcgcgggtcgacggcacccgcttcagcccgcacctcacgctcgcgcgctcggtcggccga
ccccgcgccgccggccacctggtgcaggcgctggacaccctgcatacctcgtcgtggacc
gcgaccgaggtctgcctggtccgctccgagctcggccagggccccggcgggaccccgagg
tatgccgtccgccacacctggtccctgcgctga
DBGET
integrated database retrieval system
