Serinicoccus hydrothermalis: SGUI_2892
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Entry
SGUI_2892 CDS
T04436
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SGUI_2892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serj03021
]
SGUI_2892
03400 DNA repair and recombination proteins [BR:
serj03400
]
SGUI_2892
Enzymes [BR:
serj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SGUI_2892
Transcription machinery [BR:
serj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SGUI_2892
DNA repair and recombination proteins [BR:
serj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SGUI_2892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ANS80288
UniProt:
A0A1B1NFT8
LinkDB
All DBs
Position
3157987..3161430
Genome browser
AA seq
1147 aa
AA seq
DB search
MSTAQTPSGRLSFAKIREPLEVPDLLALQTDSFDWLLGNEAWQARVAAAQAEGRDDIPTT
SGLEEIFEEISPIEDFSGSMSLSFRDHRFEEQKYSVEECQEKDMTYSAPLFVTAEFINNS
TGEIKSQTVFMGDFPLMTPRGTFIVNGTERVVVSQLVRSPGVYFERSLDKTSDKDVYSAK
VIPSRGAWLEFEVDKRDQVGVRVDRKRKQSVTVLLKALGWTNDQILEEFGDYESIRLTLE
KDNTTNQDEALLDIYRKLRPGEPPTRDAAEALLNNLYFNPKRYDLAKVGRYKINKKLGLQ
APLSESVLGIDDIVATIKYLVALHAGEESVTSPTGDVPAEVDDIDHFGNRRLRSVGELIQ
NQVRTGLSRMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQLSQFMDQNNPL
SGLTHKRRLSALGPGGLSRDRAGMEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYGRI
NPFGFVETPYRRVKDGKVTDVVDYLSAGEEDRFVIAQANAKLDDDGTFLDERVLVRAREG
EAVDVPASDVDYMDVSARQMVSAATAMIPFLEHDDANRALMGANMQRQAVPLVRAEAPLV
GTGMEHRAALDSGDVVRAAKAGAVQEVSADLVTVANDDGTYQSYRINKFTRSNQGNCYNQ
QVRVDAGDHVEAGQLLADGPATDGGEMALGRNLLVAFMPWEGYNYEDAIILSQRLVQDDV
LSSIHIEEHEIDARDTKLGPEEITRDIPNVSDDVLADLDERGIIRIGAEVRDGDLLVGKV
TPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGTVIGVKVFDREEGDELPPGVN
QLVRVYVANKRKITDGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVDVVLNPLGVPGRM
NIGQILELHLGWAAAQGWDIEGQPEWAELIPDDARSAEPRTRVASPVFDGAREEEIAGLL
DSTTPTRDGQRLIDSSGKTKLFDGRSGEPFPDEISVGYMYVLKLHHLVDDKIHARSTGPY
SMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVTGRVKVYESIVKG
DNVPEPGIPESFKVLIKEMQSLCLNVEVLSSDGSQIDLRESDTEVFRAAEELGIDLSRRE
PSSVEEV
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccgctcagacgccctccggccggctgagctttgcgaagatccgggagcccctc
gaggtcccggaccttctcgccctccagaccgacagcttcgactggctgctcggcaacgag
gcctggcaggcgcgggtcgccgctgcccaggccgaggggcgcgacgacatccccaccacc
tccggtctggaggagatcttcgaggagatctcgccgatcgaggacttctccggctccatg
tccctgagcttccgggaccaccggttcgaggagcagaagtactccgtcgaggagtgccag
gagaaggacatgacctactccgccccgctcttcgtcaccgccgagttcatcaacaactcg
accggtgagatcaagagccagacggtcttcatgggcgacttcccgctcatgacgccgcgc
ggcaccttcatcgtcaacggcaccgagcgcgtcgtcgtctcccagctcgtgcgcagcccg
ggcgtctacttcgagcgcagcctggacaagacctccgataaggacgtctactccgccaag
gtcatccccagccgtggcgcgtggctcgagttcgaggtcgacaagcgcgaccaggtcggc
gtgcgcgtcgaccgcaagcgcaagcagagcgtcacggtgctgctcaaggcgctgggctgg
accaacgaccagatcctcgaggagttcggcgactacgagtcgatccgcctcaccctggag
aaggacaacaccaccaaccaggacgaggcgctgctcgacatctaccgcaagctgcggccg
ggcgagccgccgacccgcgacgccgcggaggcgctgctcaacaacctctacttcaacccc
aagcgctacgacctcgccaaggtcggccgctacaagatcaacaagaagctggggctgcag
gcgccgctgtcggagtccgtgctgggcatcgacgacatcgtcgccacgatcaagtacctc
gtcgctctgcacgctggcgaggagtcggtgacgagcccgaccggcgacgtgccggccgag
gtcgacgacatcgaccacttcggcaaccgccggctgcgcagcgtcggcgagctcatccag
aaccaggtgcggaccggcctgtcccggatggagcgcgtcgtgcgcgagcggatgaccacc
caggacgtcgaggcgatcacgccgcagaccctcatcaacatccggccggtcgtcgcctcc
atcaaggagttcttcgggaccagccagctgagccagttcatggaccagaacaacccgctg
tccgggctgacgcacaagcggcgtctgtcggccctgggcccgggtggtctgtcccgtgac
cgggccggcatggaggtgcgcgacgtgcaccccagccactacggccgcatgtgcccgatc
gagacccccgagggtcccaacatcggtctcatcggctcgctggcctcctacggccggatc
aaccccttcggcttcgtcgagaccccctaccggcgggtcaaggacggcaaggtcaccgac
gtcgtcgactacctgtcggccggcgaggaggaccgtttcgtcatcgcccaggccaacgcc
aagctggacgacgacggcaccttcctcgacgagcgggtgctggttcgtgcccgtgagggc
gaggccgtggacgtgcccgcctcggacgtggactacatggacgtctcggcgcgccagatg
gtctccgccgcgaccgcgatgatcccgttcctcgagcacgacgacgccaaccgtgcgctc
atgggcgccaacatgcagcgtcaggccgtgccgctggtccgggccgaggccccgctggtg
ggcaccggtatggagcaccgcgccgccctcgactccggtgacgtcgtgcgcgccgccaag
gcgggtgcggtccaggaggtctccgcggacctggtgaccgtcgcgaacgacgacgggacc
taccagtcctaccggatcaacaagttcacccgctccaaccagggcaactgctacaaccag
caggtccgggtcgacgcgggcgaccacgtggaggccggtcagctcctggccgacggtccg
gcgaccgacggcggcgagatggcgctgggtcgcaacctgctcgtggcgttcatgccgtgg
gagggctacaactacgaggacgcgatcatcctctcccagcgtctggtgcaggacgacgtc
ctctcctcgatccacatcgaggagcacgagatcgacgcccgcgacaccaagctgggcccg
gaggagatcacccgggacatcccgaacgtctccgacgacgtgctggccgacctcgatgag
cgcggcatcatccgcatcggtgccgaggtccgcgacggcgacctgctcgtcggcaaggtc
acgcccaagggtgagaccgagctgaccccggaggagcgcctgctgcgcgccatcttcggc
gagaaggcgcgcgaggtccgcgacacctcgatgaaggtgccgcacggcgagaccggcacg
gtcatcggcgtcaaggtcttcgaccgcgaggagggcgacgagctgcccccgggcgtcaac
cagctggtgcgcgtctacgtcgccaacaagcgcaagatcaccgacggcgacaagctcgcc
ggccggcacggcaacaagggcgtcatctccaagatcctcccggtcgaggacatgcccttc
ctggaggacggcacgccggtcgacgtcgtgctcaacccgctgggtgtgccgggccgcatg
aacatcggtcagatcctggagctgcacctcggctgggccgcggcgcagggctgggacatc
gagggccagccggagtgggccgagctcatccccgacgacgcccgcagcgccgagccccgc
acccgcgtggccagcccggtcttcgacggtgcccgcgaggaggagatcgccggtctgctc
gactcgacgacgccgacccgcgacggtcagcgcctcatcgactccagcggcaagacgaag
ctcttcgacggccgctccggcgagcccttcccggacgagatctcggtgggctacatgtac
gtcctcaagctgcaccacctcgtggacgacaagatccacgcccgcagcaccgggccgtac
tcgatgatcacccagcagccgctgggcgggaaggcgcagttcggtggccagcgcttcggc
gagatggaggtctgggccctggaggcctacggcgccgcctacgccctgcaggagctgctg
acgatcaagtccgacgacgtcaccggacgggtgaaggtctacgagtcgatcgtcaagggc
gacaacgtccccgagccgggcatccccgagtccttcaaggtgctcatcaaggagatgcag
tcgctctgcctgaacgtcgaggtcctctcctccgacggcagccagatcgacctgcgcgag
tccgacaccgaggtcttccgggccgccgaggagctcggcatcgacctgagccgccgcgag
cccagctcggtcgaagaagtctga
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