Serinicoccus hydrothermalis: SGUI_3057
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Entry
SGUI_3057 CDS
T04436
Name
(GenBank) Heat shock protein 60 family chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
serj
Serinicoccus hydrothermalis
Pathway
serj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGUI_3057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serj03019
]
SGUI_3057
03110 Chaperones and folding catalysts [BR:
serj03110
]
SGUI_3057
03029 Mitochondrial biogenesis [BR:
serj03029
]
SGUI_3057
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serj04147
]
SGUI_3057
Enzymes [BR:
serj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SGUI_3057
Messenger RNA biogenesis [BR:
serj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SGUI_3057
Chaperones and folding catalysts [BR:
serj03110
]
Heat shock proteins
HSP60 / Chaperonin
SGUI_3057
Mitochondrial biogenesis [BR:
serj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SGUI_3057
Exosome [BR:
serj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SGUI_3057
Exosomal proteins of other body fluids (saliva and urine)
SGUI_3057
Exosomal proteins of breast cancer cells
SGUI_3057
Exosomal proteins of colorectal cancer cells
SGUI_3057
Exosomal proteins of bladder cancer cells
SGUI_3057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ANS80453
UniProt:
A0A1B1NGB6
LinkDB
All DBs
Position
3331746..3333350
Genome browser
AA seq
534 aa
AA seq
DB search
MAKQLQFNDDARKALERGVDALANAVKVTLGPKGRNVVLDKKWGAPTITNDGVTIAREVE
LEDPYENLGAQLAKEVATKTNDIAGDGTTTATVLAQAMVKEGLRNVAAGAAPSGLKRGID
AAVSAINDRLLETARELEGRDEIAQVAGLSAQDPQIGELIADAFDKVGKDGVITVEESST
TAMELEFTEGMQFDKGYLSPYFVTDSERMEAVLEDAYVLLVQGKISKVSDLLPLLEKVVG
ESKPLMIIAEDVEAEALSTLVVNKVRGTFNAVAVKAPGFGDRRKAMLQDMAILTGGQVVA
EEVGLSLDSVGLEVLGTARRVVATKDTTTIVEGSGDAQAVSDRVAQLQAEAAATDSDWDR
EKLQERIAKLAGGVCVIKVGAHTEVELKEKKHRIEDAVSATRAAIEEGIVAGGGSALVHA
APAADELGLTADEAVGAAIVRKSAAEPLRWIAENAGLQGYVATTKVGEMSPGQGLNAATG
EYGDLFAAGVIDPVKVTRSALRNAASIASMVLTTDTLVVDKPEEEDEAGHGHAH
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcagctgcagttcaacgacgacgcccgcaaggcgctggagcggggcgtcgac
gccctggccaacgccgtcaaggtgacgctgggccccaagggccgcaacgtcgtcctcgac
aagaagtggggcgcgccgaccatcaccaacgacggcgtgaccatcgcccgcgaggtcgag
ctggaggacccctacgagaacctcggggcccagctggccaaggaggtcgcgaccaagacc
aacgacatcgccggtgacggcacgaccaccgcgaccgtgctggcccaggccatggtcaag
gagggcctgcgcaacgtcgccgccggagcggcgccgtccggcctcaagcgcggcatcgac
gcggccgtgtccgccatcaacgaccgcctgctggagaccgcccgcgagctcgagggccgc
gacgagatcgcccaggtggccgggctgtccgcccaggacccgcagatcggcgagctcatc
gccgacgccttcgacaaggtgggcaaggacggcgtcatcacggtggaggagtcctccacc
accgcgatggagctcgagttcaccgagggcatgcagttcgacaagggctacctctcgccc
tacttcgtcaccgacagcgagcggatggaggccgtcctggaggacgcctacgtcctgctc
gtgcagggcaagatctccaaggtctccgacctgctgccgctgctggagaaggtcgtcggc
gagagcaagccgctcatgatcatcgccgaggacgtcgaggccgaggcactgtcgaccctc
gtggtcaacaaggtgcgcggcaccttcaacgccgtcgccgtcaaggcgcccggcttcggt
gaccgccgcaaggcgatgctgcaggacatggccatcctcaccggcggccaggtcgtcgcc
gaggaggtcggactgtccctggactcggtcggcctggaggtgctcggcaccgcccgccgg
gtcgtggccaccaaggacaccacgacgatcgtcgagggcagcggcgacgcccaggcggtg
agcgaccgcgtcgcccagctccaggcggaggcggccgcgaccgactccgactgggaccgg
gagaagctgcaggagcgcatcgccaagctcgccggcggcgtctgcgtcatcaaggtcggc
gcgcacaccgaggtggagctcaaggagaagaagcaccgcatcgaggacgccgtctcggcg
acccgcgcggccatcgaggagggcatcgtcgccggtggcggctcggccctggtgcacgcc
gcccccgccgcggacgagctgggcctgaccgccgacgaggcggtcggtgcggccatcgtc
cgcaagtccgcggccgagccgctgcggtggatcgccgagaacgccggcctgcagggctac
gtcgccaccaccaaggtcggcgagatgtcccctgggcagggactcaacgcggccaccggg
gagtacggcgacctcttcgccgccggggtcatcgacccggtgaaggtcacccgctccgcg
ctgcgcaacgccgcctcgatcgcctccatggtgctcaccaccgacaccctggtggtggac
aagcccgaggaggaggacgaggccggtcacggccacgcgcactga
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