Serratia sp. MYb239: CLM71_00670
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Entry
CLM71_00670 CDS
T05477
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CLM71_00670
Enzymes [BR:
serm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CLM71_00670
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AVJ15769
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Position
148936..150945
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AA seq
669 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLADA
VLRMDMRESKRVLNSLLPVGILTQADIVLPNELQALHANFPPERPVPAAIARLFDLPVRI
SVPLYSLERVPANPQPLAYLVLQADSYRMYKFILSALSTMLSTYLLLALILSIAITWCMN
RLMVYPLRAMAKELENISEEDAPYHQLMLPTLHQDDELGLLVRNYNRNQQRLARAYADMS
RLSTRNSVTGLPNQVLLTALLEQHIASTLRPQRFNLLVIGIETLHEATGVLSQQQREKLL
LALTEKLRQCLDKDSLLAQLSNAEFAILAKGVERPFHAMQLAQRIMRQLNAPLSIEPLSL
RPSASIGIAHYLQPGENAEQLLRSAMSAMMSAHRDGKNRILFFEPRLTERTQKRLTQESE
ILHGIEHNQFALFLQPQMAMRSNTPVGAEALLRWQQYDGSFSLPADVIPLAEELGVMVPL
GNWVLEEACRMLADWRARGIGLPLAVNISPLQMRDAGFIPHLKQLLAQHQIDPRQLQLEI
TETVRIDDFDHLLAKLRELHELGLSISLDDFGMGYSNLHYLNRLKSLPVDQIKIDKSFIC
SLPADDAMARIIGQISQVLQLPVLAEGVETAAQRDWLLQNGIEHGQGFLFSAPLPRDEFE
RRFIAGGDK
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtcaggcgttcattaacgattaagcagatggcgacggtgtccggcgtggcgctg
gtgacgatctgtatttttatcgtgattcagttgttccattttgtgcagcagcgcagggat
gactacgcccaacagctggagaatatcgcccattctgtgcgtcagccgctggcggacgcg
gtgctgcgcatggacatgcgggaaagcaaacgggtgctgaactcgctgctgccggtcggt
attctgacgcaggcagatattgtcttgccgaatgaactgcaggcgctgcacgccaacttc
ccgccggaacgcccggtgccggcggcgatcgcgcggctgttcgacctgccggtgcgcatc
tcggtgccgctctattcgctggagcgggtgccggccaatccgcagccgctggcctatctg
gtgctgcaggccgactcctaccgcatgtacaaatttatcctcagcgcgctgtcgaccatg
ctgtcgacctatctgctgctggcgctgattctgtcgatcgccatcacctggtgcatgaac
cggctgatggtctatccgctgcgcgcgatggcgaaagagctggaaaatatctccgaagag
gatgcgccgtatcatcagctgatgctgccgacgctgcatcaggatgacgaactgggcctg
ctggtgcgcaattacaaccgcaatcagcagcggctggcgcgggcatatgcggatatgagc
cgcctcagtacgcgcaactcggtcaccgggctgccgaatcaggtactgctgaccgccctg
ctggagcagcatatcgcgtcgaccctgcgtccccagcggtttaacctgctggtgatcggc
attgaaacgctgcatgaggccaccggcgtattgtcgcagcagcagcgggaaaagctgctg
ctggcgctgacagaaaaattacgccagtgcctggataaggattcgctgctggcgcagctg
agcaatgccgagttcgccattctggcaaagggcgttgaacggccgtttcacgccatgcag
ctggcgcagcgcatcatgcggcagcttaatgcgccgctgagcattgagccgttgtcgctg
cggccgagcgccagcatcggcatcgcccattacctccagccgggggaaaacgccgaacag
ctgttgcgcagcgccatgtcggcgatgatgtcggcccaccgcgacggcaagaaccgcatc
ctgttctttgagccgcggctgacggaacgcacgcaaaagcgcctgacgcaggaaagcgaa
attctgcacggtatcgaacataaccagtttgccctgttcctgcagccgcagatggcgatg
cgcagcaacacgccggtcggcgcggaagccctgctgcgctggcagcagtatgacggcagc
ttcagcctgccggcggatgtcatcccgctggcggaagagctgggggtgatggtgccgctg
ggcaactgggtgctggaagaggcctgccgcatgctggccgactggcgggcgcggggcatc
ggcctgccgctggcggtaaatatttcaccgctgcagatgcgcgacgccgggtttatcccc
cacctgaaacagctgctggcgcagcaccagatcgacccgcgtcagctgcagctggaaatc
accgaaacggtgcgtatcgacgactttgaccacctgctggcgaagctgcgcgagctgcat
gagctgggcttgtctatctcactggacgatttcggcatggggtattccaacctgcattac
ctcaaccgcctcaagagcctgccggtcgatcagatcaagatcgacaaaagcttcatctgc
agcctgccggcggatgatgccatggcgcgcattatcggccagatttcgcaggtgctgcag
ttgccggtgctggcggaaggggtggaaacggcggcgcagcgcgactggctgctgcaaaac
ggtatcgaacacggccagggcttcctgttctcggccccgctgccgcgcgacgagtttgaa
cggcggtttatcgccggcggcgataaatag
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