Serratia sp. MYb239: CLM71_01265
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Entry
CLM71_01265 CDS
T05477
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00071
Fatty acid degradation
serm00280
Valine, leucine and isoleucine degradation
serm00310
Lysine degradation
serm00362
Benzoate degradation
serm00380
Tryptophan metabolism
serm00410
beta-Alanine metabolism
serm00640
Propanoate metabolism
serm00650
Butanoate metabolism
serm00907
Pinene, camphor and geraniol degradation
serm00930
Caprolactam degradation
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01120
Microbial metabolism in diverse environments
serm01200
Carbon metabolism
serm01212
Fatty acid metabolism
Module
serm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CLM71_01265 (fadB)
00650 Butanoate metabolism
CLM71_01265 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CLM71_01265 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CLM71_01265 (fadB)
00310 Lysine degradation
CLM71_01265 (fadB)
00380 Tryptophan metabolism
CLM71_01265 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CLM71_01265 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CLM71_01265 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CLM71_01265 (fadB)
00930 Caprolactam degradation
CLM71_01265 (fadB)
Enzymes [BR:
serm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CLM71_01265 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CLM71_01265 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CLM71_01265 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CLM71_01265 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AVJ15873
LinkDB
All DBs
Position
complement(275698..277887)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLENGIAELVFDAPGSVNKLDTRTVAALGEALDVLEKQTELKGLLLRSN
KNAFIVGADITEFLSLFAAPAEKLQHWLTFANSIFNRLEDLPVPTIAAINGYALGGGCEC
VLATDFRVATPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDIGAKEALK
VGLVDAIVAPEKLADAARQMLQQAIDGRLDWRASRQPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAAGLGRDEALKLETASFVPLARSNEARALVGIFLNDQFVK
GQAKKLAKDRAAPKQAAVLGAGIMGGGIAYQSALKGVPVLMKDISEKSLTLGMGEAAKLL
NKQLERGKLDGMKMAGVLATIQPTLDYAGIERAQVIVEAVVENPKVKAAVLAEVEGLIGE
DTVLASNTSTIPINELAKSLQRPQNFCGMHFFNPVHRMPLVEIIRGERTSDETIAAVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRQVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMSKDYRDAVDVMFDNQRFGQKNQVGFYRYSQDNKGRP
RKENDEQTDALLAAVSQPRQNISAEETIARMMIPMINEVVRCLEEGIIASPAEADMALVY
GIGFPPFHGGVFRYLDTMGTAHYVEMAQRYAHLGALYQVPAGLRAKAERNETYYPVTAPI
ADVSTGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactacactggctcgagaacggtatcgccgagctg
gtgtttgatgccccaggctccgtcaacaagctggatacccgcaccgttgcagcgctgggc
gaagcgctcgacgtactggaaaaacagaccgagctgaaagggctgctgctgcgttccaac
aaaaacgcatttatcgtcggtgccgatatcaccgaattcctgtcgctgttcgccgccccg
gcggaaaaactgcaacattggctgactttcgccaattccattttcaaccgcctggaagat
ttaccggtgccgaccattgccgccatcaacggctatgcgctaggcggcggctgcgagtgc
gtgttggcgacggacttccgcgtcgcgacgccggatgcgcgcatcggcctgccggaaacc
aaactcggcattatgccgggcttcggcggctcggtacgtctgccgcgtctgctcggcaac
gacagcgcactggagatcatcgccgcaggtaaagacatcggcgccaaagaagcgctgaaa
gtcggcctagtcgatgcgatcgtcgcgccggaaaaattggcggatgccgcgcgtcagatg
ctgcaacaggccattgacgggcggttagactggcgcgccagtcgtcagccgaagctggag
ccgctgaagctcagcccgattgaagcagccatgagcttcactaccgccaagggcatggtt
ctgcaaacggccggcaaacactatccggcgccaatgaccgcggtgaagacgatagaagcc
gccgccggattgggacgcgatgaagcactgaagctggagaccgccagctttgtgccgttg
gcgcgttccaatgaagcccgggcgttggtcggtattttcctcaacgatcagtttgtgaaa
ggtcaggcgaaaaaactggcgaaagatcgcgccgcgccgaagcaggccgcagtgctgggc
gccggtattatgggcggtggcatcgcctaccagtccgcattaaaaggcgtgccggtactg
atgaaagatatcagtgaaaaatcgctgacgctcggcatgggcgaagccgccaagctgctg
aacaaacagttggagcgcggcaagctcgacggcatgaagatggccggcgtgctggcaacc
attcagcccacgctggactacgccggcattgaacgcgctcaggtgattgtggaagcggtg
gtggagaatccgaaggtcaaagccgcagtgttggccgaagttgaagggctcatcggcgaa
gatacggttctggcctccaatacctcgactattccgattaatgaactggcaaaatcgctg
caacggccgcagaacttctgcggtatgcacttctttaacccggtgcatcgcatgccgctg
gtagaaatcatccgcggtgaacgcaccagcgacgaaaccatcgccgccgtggtggcctac
gcgtcacgcatggggaaaacgccgatcgtggtcaacgactgcccgggcttcttcgtcaac
cgcgtgctgttcccttactttgccggcttcagcctgctgttgcgggacggcgctgatttc
cgtcaggtcgataaagtgatggaaaaacaattcggctggccaatgggtccggcctacctg
cttgacgtggtcggcattgatactgcacatcacgcccaggccgtgatggccgccggcttc
ccagaacgcatgagcaaggactaccgcgacgcggtcgacgtgatgttcgacaaccagcgc
ttcggccagaaaaatcaggtgggtttctaccgctatagccaggataacaaaggcagaccg
cgtaaagagaacgacgaacagaccgatgcgctgttagcggcggtcagccagccgcgtcag
aacatcagcgccgaggaaactatcgcgcgcatgatgattccaatgattaacgaagtggtg
cgctgtctggaagaaggcatcatcgccagcccggcggaagccgatatggcactggtttac
ggcatcggcttcccaccgttccacggcggcgtcttccgctatctggataccatgggcacg
gcccattacgttgaaatggcgcaacgttacgcacatctgggcgcgctgtatcaggttccg
gccggcctgcgcgccaaagccgaacgtaatgaaacctactacccggtgacggcgccaatc
gcggatgtctccacgggccaaccggcatga
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