Serratia sp. MYb239: CLM71_01595
Help
Entry
CLM71_01595 CDS
T05477
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLM71_01595 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serm03019
]
CLM71_01595 (groL)
03110 Chaperones and folding catalysts [BR:
serm03110
]
CLM71_01595 (groL)
03029 Mitochondrial biogenesis [BR:
serm03029
]
CLM71_01595 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serm04147
]
CLM71_01595 (groL)
Enzymes [BR:
serm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CLM71_01595 (groL)
Messenger RNA biogenesis [BR:
serm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLM71_01595 (groL)
Chaperones and folding catalysts [BR:
serm03110
]
Heat shock proteins
HSP60 / Chaperonin
CLM71_01595 (groL)
Mitochondrial biogenesis [BR:
serm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CLM71_01595 (groL)
Exosome [BR:
serm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLM71_01595 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CLM71_01595 (groL)
Exosomal proteins of breast cancer cells
CLM71_01595 (groL)
Exosomal proteins of colorectal cancer cells
CLM71_01595 (groL)
Exosomal proteins of bladder cancer cells
CLM71_01595 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
V18-19
Motif
Other DBs
NCBI-ProteinID:
AVJ15922
LinkDB
All DBs
Position
348340..349983
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFGNDARVKMLNGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDETVGKLIAEAMEKVGKEGVITVEEG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGSVELESPFILLADKKVSNIRELLPVLEAV
AKAGKPLLIVAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGMELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEATIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIAELKGDNEDQNVGIKVALRAMEAPLRQIVVNAGEEASVIANSVKAGEGSYGYNA
YSEEYGDMIGMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKEDKADMGAAGMGGM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggcaatgacgcacgcgtaaaaatgcttaacggcgtg
aacattctggcggacgcggtaaaagtcaccctgggcccgaaaggccgtaacgtagtgctg
gacaaatctttcggcgcgccaaccatcaccaaagacggcgtatccgtagcgcgtgaaatc
gaactggaagacaagttcgaaaacatgggcgcacagatggtgaaagaagttgcctccaaa
gcgaacgacgctgcgggcgacggcaccaccaccgcaaccgttctggcgcaggccattgtg
aacgaaggcctgaaagccgttgctgcgggcatgaacccgatggatctgaagcgtggcatc
gacaaagcggttattgcagcggtagaagaactgaaaaaactgtccgtaccttgctctgat
tccaaagcgattgcacaggtcggcaccatctctgcaaactccgacgaaaccgtgggtaaa
ctgattgcagaagcgatggaaaaagtcggtaaagaaggcgttatcaccgttgaagaaggc
accggcctgcaggacgagctggacgtggttgaaggtatgcagttcgaccgcggctacctg
tccccatacttcatcaacaagccggaaaccggttctgtcgagctggaaagcccgttcatc
ctgctggctgacaaaaaagtttccaacatccgtgaactgctgccagtactggaagccgta
gcgaaagccggcaaaccgctgctgatcgttgctgaagacgttgaaggtgaagcgctggct
acgctggtggtgaacaccatgcgcggcatcgtgaaagtggctgcggttaaagcgccaggc
ttcggcgaccgtcgtaaagccatgctgcaggatattgctaccctgactgccggcaccgtg
atctctgaagagatcggcatggaactggaaaaaaccacgctggaagacctgggccaggcc
aaacgcgttgtgatcaacaaagacaccaccatcatcatcgatggcgtcggcgacgaagcg
accatccagggccgcgtagcgcagattcgccagcagatcgaagaagcgacctccgactac
gatcgtgaaaaactgcaggagcgtgttgctaaactggcaggcggcgttgccgttatcaaa
gttggcgcagctaccgaagttgaaatgaaagagaagaaagcccgcgttgaagatgccctg
cacgcgacccgtgctgcggttgaagaaggcgtggttgccggcggcggcgttgcgctgatc
cgcgtagccagcaaaattgccgagctgaaaggcgacaacgaagatcagaacgtgggtatc
aaagttgcgctgcgcgcgatggaagcgccactgcgccagatcgtggtcaacgccggtgaa
gaagcttccgttatcgccaacagcgtgaaagcgggcgaaggcagctacggttacaacgct
tactctgaagagtacggcgacatgatcggcatgggcatcctggatccaaccaaagtaacc
cgttctgcactgcagtacgcggcatccgtggctggcctgatgatcaccaccgagtgcatg
gttaccgatctgccgaaagaagataaagccgacatgggcgctgcaggtatgggcggcatg
ggcggtatgggcggcatgatgtaa
DBGET
integrated database retrieval system