Serratia sp. MYb239: CLM71_01840
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Entry
CLM71_01840 CDS
T05477
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00230
Purine metabolism
serm00240
Pyrimidine metabolism
serm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CLM71_01840 (cpdB)
00240 Pyrimidine metabolism
CLM71_01840 (cpdB)
Enzymes [BR:
serm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
CLM71_01840 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
CLM71_01840 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PTase_Orf2
Motif
Other DBs
NCBI-ProteinID:
AVJ15967
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All DBs
Position
complement(392254..394224)
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AA seq
656 aa
AA seq
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MMKRPLALSALALLISATAQAATVDLRVLETTDLHGNMMDFDYYKDKPTEKFGLVRTASL
IQQARQQAVNSVLVDNGDIIQGSPMADYMAAKGLRKGDVHPVYKALNQLDYVVGNIGNHE
FNYGLDYLQTALAGAKFPYVNANVIDSKTQKPLFTPYIIVDTPVKDRDGHTHTLRIGYIG
FVPPQIMVWDKANLQGKVTVNDITATAKRYVPEMRQQGADLVIAIPHSGLSSAPYKAMAE
NSVYYLSQVPGIDAIMFGHAHAVFPSKDFAAIKGADIEQGLLNGVPAVMPGQWGDHLGVV
DLQLSNDSGRWAVTRAKAEARPIYDSAAKRSLAAEDAGLVKVLADDHKGTREFVSQPIGK
SDGNMYSYLALVQDDPTVQIVNNAQKAYVEHYIQGDPDLADLPVLSAAAPFKVGGRKNDP
ASFVEVEKGQLTFRNAADLYLYPNTLVVVKASGKEVKEWLECSAGQFNRIDVNSSKPQSL
INWDGFRTYNFDVIDGVSYQVDVSQPARYDGECQLINDKAERIKQLTFNGKPIDPNATFL
VATNNYRAYGGKFAGTGDKHIAFASPDENRAVLSAYISAESKKHGAVHPQADNNWRLANI
DAAQPLDIRFETSPSDKAAAFIRQNARYPLKPVGNDSIGFAIYQVGLQTPPAEAAR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaacgtccgctggcattatccgccctcgccctgctgatttccgccacggcgcag
gcagcgacggtcgacctgcgcgtgctggaaaccaccgacctgcacggcaatatgatggac
tttgattactataaggataagcccaccgagaaatttgggctggtgcgtaccgccagcctg
attcagcaggcgcgccagcaggcggttaacagcgtgctggtcgacaacggcgatattatt
cagggcagcccgatggcggactatatggcggccaaggggttgcgcaaaggcgacgtacac
ccggtctataaggcgctgaaccagctggattatgtggtaggcaatatcggcaaccacgaa
ttcaattacggtcttgattacctgcaaaccgccctcgccggcgccaagttcccctacgtt
aacgccaacgttatcgacagcaaaacccagaaaccgctgttcaccccgtatattatcgtc
gatacgccggtaaaagaccgcgacggccacacgcacacgctgcgcatcggctatatcggt
ttcgtcccgccgcaaattatggtctgggacaaggccaacctgcagggtaaggtcacagtc
aatgatattaccgccaccgccaaacgctacgtgccggaaatgcgtcagcaaggggccgat
ctggtgatcgccattccccactccggcctctccagcgcgccttataaagccatggcggaa
aattcggtctactacctcagccaggtgccgggcatcgacgccattatgttcggccacgcc
cacgcggtctttcccagtaaggacttcgccgcgattaaaggcgccgatattgagcagggc
ctgctgaacggcgtaccggcagtgatgccgggccaatggggcgatcacctcggcgtggtg
gatttacagctcagtaacgacagcggccgctgggcggtcacccgtgccaaggccgaggcg
cggccgatttacgacagcgccgccaaacgttcgctggcggcggaagacgccggtctggtg
aaggtgctggccgacgatcataagggcacccgcgagttcgtcagccagccgatcggcaag
tccgacggcaatatgtacagctatctggctttggtgcaggacgatccgacggtgcagatc
gtcaacaacgcgcagaaagcctatgtggagcactacattcagggcgatccggatctggcg
gatctgccggtgctgtccgccgccgcgccgttcaaggtcggcggccgcaaaaacgatccg
gccagctttgtggaagtggaaaagggacagctgaccttccgcaacgcggccgatctgtat
ctctaccccaatacgctggtggtggtcaaagccagcggtaaagaggtgaaagagtggctg
gagtgctccgccgggcagtttaaccgcatcgacgtcaacagcagtaagccgcagagcctg
attaactgggacggcttccgcacctataacttcgacgtgattgacggcgtcagctaccag
gtagacgtcagtcaaccggcgcgctacgacggtgaatgtcagttaatcaatgataaagcg
gaacggatcaaacagctgaccttcaacggcaaaccgatcgacccgaacgccacattcctg
gtggctaccaacaactaccgcgcctatggcggcaagtttgccggcaccggcgacaaacac
atcgccttcgcctcgccggatgaaaaccgcgccgtactgtcggcctatattagcgcagag
agtaaaaaacacggggcggtgcatccgcaggcggacaacaactggcgtctggccaacatc
gacgccgcccagccgctggatatccgttttgaaacctcaccaagcgacaaggccgcggcg
tttatccggcaaaacgcccgttacccgctgaagcctgtcggcaacgacagcatcggtttt
gcgatttatcaggtcggcctgcaaacgccgcccgcagaggcagcgcgctaa
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