Serratia sp. MYb239: CLM71_02050
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Entry
CLM71_02050 CDS
T05477
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serm03016
]
CLM71_02050
Enzymes [BR:
serm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CLM71_02050
Transfer RNA biogenesis [BR:
serm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLM71_02050
Prokaryotic type
CLM71_02050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AVJ16006
LinkDB
All DBs
Position
435462..436406
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRCYNANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVNITQQQLDAALETFRGDIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELKFIRWEGDELELEVHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVAKYPIERMVTLEQLNALLEQAQAEGVAPGELLDPL
LMPMDSPCADFPEVNLLPAVAGYVKQGQPVQAAGAPASGMVRITEGDAHKFIGVGEIADD
GRVAPKRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgcgatattcacggcgtgctgttgctggataagccg
cagggcctgtcctccaatgacgcgctgcaaaaagtaaagcgttgttataacgccaaccgc
gcgggccataccggcgcgctcgatccgctggcgaccggcatgctgccgatctgcctgggg
gaagccaccaagttttcccagttcctgttggattccgacaagcgctatcgggtgattgcc
cgcctggggcagcgtaccgatacttcggacgcagacggccagatcgtgcaggaacgcccg
gtgaatattacccagcagcagcttgatgcggcgctggagactttccgcggcgacatccag
caggtgccgtcgatgtactccgcgttgaagtatcagggcaaaaaactgtatgaatacgcg
cgtcagggcattgaagtgccgcgtgaagcgcgcagcattacggtttacgagctgaagttt
atccgctgggaaggcgatgagctggagctggaagttcactgttccaaaggcacctatatc
cgtaccattaccgacgatctgggcgaactgctgggctgtggcgcgcacgtgatttatctg
cgtcgtctgcaggtggcgaaatatccgatcgaacgtatggtgacgctggaacaactgaac
gcgctgctggaacaggcgcaggccgaaggcgtggcgccgggcgaactgctcgatccgctg
ctgatgccgatggacagcccatgcgccgatttccctgaagtgaacttgctgccggcggtg
gcgggttatgtcaagcagggccagccggtgcaggctgccggcgcgccggcttccggcatg
gtgcgtatcactgaaggcgatgcgcataaatttatcggcgtcggcgagattgccgacgac
ggtcgtgtggcgcctaagcgtttggttgtcgaacatttcgactaa
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