Serratia sp. MYb239: CLM71_03200
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Entry
CLM71_03200 CDS
T05477
Symbol
carB
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00220
Arginine biosynthesis
serm00240
Pyrimidine metabolism
serm00250
Alanine, aspartate and glutamate metabolism
serm01100
Metabolic pathways
serm01110
Biosynthesis of secondary metabolites
serm01240
Biosynthesis of cofactors
Module
serm_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
CLM71_03200 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
CLM71_03200 (carB)
00220 Arginine biosynthesis
CLM71_03200 (carB)
Enzymes [BR:
serm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
CLM71_03200 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
BamE
Motif
Other DBs
NCBI-ProteinID:
AVJ16211
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All DBs
Position
682613..685837
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AA seq
1074 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALELERQGVLEEFGVTMIGATA
DAIDKAEDRRRFDVAMKKIGLDTARSGIAHTMEEALAVAADVGFPCIIRPSFTMGGTGGG
IAYNREEFEEICERGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFAVNPKTGRLIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELMNDITGGRTPASFEPSIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQESMQKALRGLEVGATGFDPKVSLDDPEA
LTKIRRELKDAGPDRIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVRLEEEVATSG
INGLTAEFLRTLKRKGFADARLAKLAGVTEGAVRKLRQGYGLHPVYKRVDTCAAEFSTDT
AYMYSTYEEECESNPNSDRPKVMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVN
CNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEQPKGVIVQYGGQTPLKLARDLEAAGVP
IIGTSPDAIDRAEDRERFQQAVNRLSLKQPANATVTAIEQAVEKAAGIGYPLVVRPSYVL
GGRAMEIVYDETDLRRYFQTAVSVSNDAPVLLDRFLDDAVEVDVDAICDGERVLIGGIME
HIEQAGVHSGDSACSLPAYTLSKDIQDVMRQQVEKLAFELQVRGLMNVQFAVKDNEVYLI
EVNPRAARTVPFVSKATGVPLAKVAARVMAGKTLAEQGVTEEVIPPYYSVKEVVLPFNKF
PGVDPILGPEMRSTGEVMGVGRTFAEAFSKAMLGSNSGMRKQGRALLSVREGDKARVVDL
AASLLKQGFELDATHGTAVVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIVNTTAGR
QAIEDSKLIRRSALQYKVHYDTTLNGGFATAMALKADPTEQVTSVQEMHARIGK
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgatataaaaagcatcctgatcctcggcgctggcccgatcgttatc
ggccaggcctgtgaatttgactactccggcgcgcaggcgtgtaaggcgctgcgcgaagag
ggttaccgcgttattctggtgaactccaacccggcgaccatcatgaccgacccggaaatg
gccgatgcgacctacattgagccgatccactgggaagtggtgcgtaaaatcatcgaaaaa
gagcgcccggatgcggtgctgccgaccatgggcggccagactgcactgaactgcgcgctt
gagctggagcgtcagggcgtgctggaagagttcggcgtgacgatgatcggcgcgaccgcc
gatgcgatcgacaaggctgaagaccgccgccgttttgacgtggcgatgaagaaaatcggc
ctggacaccgcacgttccggcattgcgcacaccatggaagaagcgctggcggtggccgcc
gatgtcggcttcccgtgcattatccgtccgtccttcaccatgggcggcaccggtggcggc
atcgcctataaccgcgaagagtttgaagaaatctgcgagcgcggcctggatctgtcgcca
accaacgagctgctgattgatgaatcgctgatcggttggaaagagtacgagatggaagtg
gtgcgtgataagaacgacaactgcatcatcgtctgctcgattgaaaacttcgacgctatg
ggcatccacaccggcgactcgattaccgtcgcgccggcgcagaccctgaccgacaaagag
tatcaaatcatgcgtaacgcctcgatggcggtactgcgtgaaatcggcgtggaaaccggc
ggttctaacgtgcagtttgcggtgaacccgaaaaccggtcgcctgatcgtcatcgaaatg
aacccgcgcgtatcgcgctcctcggcgctggcgtcgaaggccaccggcttcccgatcgcc
aagatcgccgccaagctggcggtgggttatacgctggatgagctgatgaacgacatcacc
ggcggccgtactccggcgtcgtttgagccgtccatcgactacgtggtgaccaaaatccct
cgcttcaactttgagaaattcgccggcgccaatgaccgcctgacgacgcagatgaagtcg
gtcggcgaagtgatggcgattggccgcacccagcaggagtcgatgcagaaagcgctgcgc
ggcctggaagtgggcgccaccgggtttgacccgaaagtgagcctggacgacccggaagcg
ctgaccaagatccgccgcgagctgaaagacgccggcccggatcgcatctggtatatcgcc
gacgcgttccgcgccggcctgtcggtggacggggtgttcaacctgaccaatatcgaccgc
tggttcctggtgcagattgaagagctggtgcgcctggaagaagaggtggcgacgagcggc
atcaacggcctgacggcggaattcctgcgcaccctgaagcgcaaaggctttgccgacgcg
cgcctggcaaaactggccggcgtgaccgaaggcgcggtgcgcaaactgcgtcagggctat
ggcctgcatccggtgtacaaacgcgtggatacctgcgcggcggaattctccaccgatacc
gcctatatgtactccacctatgaagaagagtgcgaatccaacccgaacagcgaccggccg
aaggtgatggtgctgggcggcgggccgaaccgtatcggtcagggcattgaatttgactac
tgctgcgtacacgcctcgctggcgctgcgcgaagacggctacgagaccattatggtcaac
tgtaacccggaaaccgtgtcgaccgactacgacacctccgaccgtctgtacttcgaaccg
gtgacgctggaagacgtgctggaaatcgtgcgtatcgaacagccgaaaggggtgattgtt
cagtacggcggccagacgccgctgaaactggcgcgcgatctggaagcggccggcgtgccg
attatcggcaccagcccggacgccatcgaccgcgcggaagaccgcgagcgcttccagcag
gcggttaaccgtctgagcctgaagcagccggccaacgctacggtcacggcgattgagcag
gcggtagagaaagcggcgggcatcggttatccgctggtggtgcgtccgtcttacgtgctg
ggcggccgtgcgatggaaatcgtctatgacgaaaccgacctgcgccgctacttccagacc
gcggtcagcgtgtccaacgatgcgccggtgctgctggatcgcttcctggacgacgcggtt
gaagtcgacgtcgacgcgatttgcgacggcgagcgcgtgctgattggcggcatcatggag
catatcgaacaggccggcgtacactccggcgactccgcctgttcactgccggcctacacc
ctgagcaaagacattcaggacgtgatgcgtcagcaggtggaaaaactggcgtttgagctg
caggtgcgcggcctgatgaacgtccagtttgcggtgaaggacaacgaggtctacctgatt
gaagtcaacccgcgcgccgcgcgtaccgtgccgtttgtctccaaagccaccggcgtgccg
ctggcgaaagtggcggcgcgcgtgatggcgggcaaaacgctggccgaacagggcgtgacg
gaagaggtgattccaccgtactactcggtgaaagaagttgtgctgccgttcaacaaattc
ccgggcgtcgacccgattctggggccggaaatgcgctccaccggggaagtgatgggcgtt
ggccgcacctttgccgaagccttctccaaggcgatgctgggcagcaactccggcatgcgc
aagcagggccgggcgctgctgtcggtacgtgaaggcgacaaggcgcgggtggtcgatctg
gccgccagcctgctgaagcagggcttcgagctggatgcgacccacggcaccgcggtggtg
ctgggcgaagcgggcatcaacccgcgcctggtcaacaaggtgcacgaaggccgtccgcac
attcaggaccgtatcaagaatggcgagtacacctacatcgtgaacaccaccgccggccgc
caggcgattgaggactccaagctgattcgacgcagcgcgctgcagtataaagtgcattac
gacaccacgctgaacggcggctttgccaccgcgatggcgctgaaggccgatccgaccgaa
caggtcacctcggttcaggagatgcacgcgcgcatcggcaaataa
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