Serratia sp. MYb239: CLM71_04095
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Entry
CLM71_04095 CDS
T05477
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serm03009
]
CLM71_04095
Enzymes [BR:
serm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CLM71_04095
Ribosome biogenesis [BR:
serm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CLM71_04095
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
TruB_N
S4_2
Motif
Other DBs
NCBI-ProteinID:
AVJ16374
LinkDB
All DBs
Position
876926..877903
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AA seq
325 aa
AA seq
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MAQQVQLTATVAESQLGQRLDQALAELFPDYSRSRIKEWILEDRVQVDGKTINKPKEKVL
GGETVAIDAQIEEEARWEPQNIPLDIVYEDGDILVINKPRDLVVHPGAGNPDGTVLNALL
YHYPEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVEALQARDITREYEAVAIGTMT
AGGTVEEPIARHSTKRTHMAVHPMGKPAVTHYRIMEHFRAHTRLRLRLETGRTHQIRVHM
AHISHPLVGDPLYGGRPRPPKGASDAFIHTLRGFDRQALHATMLRLYHPISGIQMEWHAP
LPQDMVDLIDALKADTEEFKDQMDW
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacaagtacaactcaccgcaacggtggccgaatctcaactcggacaacgttta
gatcaggctttggccgaattgttccctgattattcaagatctcgcataaaagagtggatt
ttggaagatcgggtgcaggtcgacggcaaaacgataaacaaaccgaaagagaaggtgctg
ggaggagagacggtcgccattgatgcgcagattgaagaagaagcgcgttgggagccgcag
aacatcccgctggatatcgtctatgaagacggggatattctggtgatcaacaagccgcgc
gatctggtggtgcacccgggggcaggcaacccggacggcacggtgcttaacgccttgctg
taccactatcccgagattgttgacgtaccgcgcgccggcattgtgcaccgtctggataaa
gacaccaccggcctgatggtggtcgccaaaaccgtgccggcgcagacgcgcctggtggaa
gcgctgcaggcgcgtgatattacccgcgagtatgaagcggtggcgattggcaccatgacc
gccggcggtacggtggaggagccgattgcgcgccactccaccaaacgtacccacatggcg
gtgcatccgatggggaaaccggcggtaacccattaccgcattatggagcacttccgcgcg
catacgcggctgcggttgcggctggaaaccgggcgtacgcaccagattcgcgtacatatg
gcgcatatcagccacccgctggtaggcgatccgctgtacggcggccgtccgcgtccgcct
aaaggcgcatcggacgcgtttatccataccctgcgcggttttgaccgtcaggcgctgcat
gccaccatgctgcgtttgtatcatccgatcagcggcatccagatggagtggcatgcgccg
ctgccgcaggatatggtcgaccttatcgacgcgctgaaagcggataccgaagaatttaaa
gaccagatggattggtga
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