Serratia sp. MYb239: CLM71_04230
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Entry
CLM71_04230 CDS
T05477
Name
(GenBank) murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
CLM71_04230
Enzymes [BR:
serm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CLM71_04230
Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CLM71_04230
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM_RLK
LysM3_LYK4_5
LysM_OapA
NMB0315_dom_I
LysM1_NFP_LYK
LysM2_CERK1_LYK3_4_5
HTH_Tnp_1
DUF3071
LPAM_MltD
Motif
Other DBs
NCBI-ProteinID:
AVJ16394
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All DBs
Position
complement(902962..904353)
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AA seq
463 aa
AA seq
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MKAKAILLASVLLVGCQSSKQDAPAPEQHAQSLSSAGQESEAGKYTANSRASSAQWLNKN
GNSAQQQDLWNFISDELKMEVPENSRIREQKRKYLKSKSYLHDVTLRAEPYMYWIVEQIK
KRNMPMELVLLPIVESAFDPHATSSANAAGLWQIVPQTGRNYGLKNNKWYDGRRDVVAST
TAALNMMEYLNRMFKGDWLLTVAAYNSGEGRVMRAVKANRRQGKPTNFWALSLPRETSIY
VPKMLALSEIIKHSKKYGVRLPKTDESRALARIDVGQQMRLTQAAELSGLSLTKIKAFNP
GYKKGVTAPNGPHYIMVPQGHADQLKGSLANREVAVTQPTTQLAKNSGLTGGSTYKVRSG
DTLSGIAQRLNLSTSDLQSWNNLRSKSTLKVGQTLQVARNGGSNSSITYRVRKGDSLASI
ARRHGVEINDVMRWNSALERKNSSLQPGLTLTLFVDNNASPDT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaaagcgatattactcgcctcagtcttgcttgttggttgccagtcgtccaag
caggacgcgccggctccagaacagcatgcacagagtttgtcttcggcaggtcaagaaagt
gaagcaggaaagtacacagcaaatagtcgagcgagctcggcgcagtggctgaataaaaac
ggcaacagcgcccagcagcaagatctgtggaacttcattagcgacgagctgaagatggag
gttccggaaaactcccggatccgtgaacaaaaaagaaagtatttaaaaagtaagagctat
ctccacgatgtaacattacgggctgagccgtacatgtactggatagtcgagcagattaaa
aaacgcaatatgccgatggaactggtactgctacccatagtggagagcgcttttgaccca
cacgcgacctcgagcgccaacgccgcagggctttggcagatcgtgccgcaaacgggtcgt
aactatggtttaaagaacaacaaatggtatgacggacgtcgtgacgtcgtcgcctcaacc
acggcggcgctgaacatgatggaatacctgaaccgcatgtttaagggcgactggctgctg
accgttgccgcctataacagcggcgaaggtcgcgtgatgcgcgccgtcaaggcgaaccgc
cgccagggtaaaccgaccaacttctgggcattgtcgcttccgcgtgaaacgtcaatctat
gtcccgaaaatgctggcgctgagcgagattatcaagcacagcaaaaagtatggcgtgcgt
ttgccgaaaacggatgaaagccgggcgctggcgcgtatcgacgtcggccagcagatgcgt
ctgacccaggcggccgagctgtccgggctgtcgctgaccaagattaaggcgtttaatccg
ggttacaaaaaaggtgtgaccgcgcctaacgggcctcattacatcatggttccccaaggg
catgccgatcagctgaaagggtcgctggctaaccgcgaggttgccgtgacacagccaacc
acccagttggcgaaaaacagcggcctgaccggcggcagtacctataaagtgcgctccggc
gacaccttatcgggcattgcccagcggctgaacctcagcaccagcgatctgcagagctgg
aacaacctgcgcagcaaaagcacgctgaaggttggacaaacgctgcaggtagcccgcaat
ggcggcagtaacagcagcatcacctaccgcgtacgcaaaggtgactcgctggccagcatt
gcgcgtcgtcacggcgttgaaattaacgacgtgatgcgctggaacagcgcgctcgaacgc
aagaacagcagcttgcagccgggcctgacgctgacgttgtttgtggacaacaatgcctcg
ccggatacctga
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