Serratia sp. MYb239: CLM71_04250
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Entry
CLM71_04250 CDS
T05477
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03030
DNA replication
serm03430
Mismatch repair
serm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLM71_04250
03430 Mismatch repair
CLM71_04250
03440 Homologous recombination
CLM71_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serm03032
]
CLM71_04250
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_04250
Enzymes [BR:
serm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLM71_04250
DNA replication proteins [BR:
serm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLM71_04250
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLM71_04250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AVJ16398
LinkDB
All DBs
Position
906486..907223
Genome browser
AA seq
245 aa
AA seq
DB search
MITTPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRHYHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFDQIADEFLDFIRGGELVIHNASFDIGFMDHEFRMLQRDIPN
TDTFCTITDSLMMARRLFPGKRNNLDALCSRYEIDNSKRTLHGALLDAEILAEVYLAMTG
GQTSMAFQMEGDTQQSDSVQEVQRIVRPANAMKVVYASDEELVAHEARLDLVAKKGGGNC
LWRVE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgatcactacaccaaccagacagatcgttcttgataccgaaaccaccggtatgaacaag
ctaggggttcactatgaagggcaccgcatcatcgaaatcggtgcggtagaggtgatcaac
cggcgtttgaccggccgccactatcatgtgtatgtcaaacccgatcggctggtggatccg
gaagcctacggcgttcacggcatcagcgatgaattcctggctgacaagcccaccttcgat
cagattgccgacgagtttctcgactttatccgaggcggcgaactcgttattcataacgca
tcgttcgatatcggctttatggatcacgaattccgcatgctgcagcgggatatcccgaat
accgataccttctgtaccatcaccgatagcctgatgatggcgcgccgcctgttcccgggc
aagcgcaacaacctggatgccttgtgcagccgctacgaaatcgacaacagcaagcgtacg
ctgcacggcgcattgctcgatgccgagatcctggcggaagtctatctggcgatgaccggc
ggccagacttcgatggcgttccagatggaaggggatacccagcagagcgactcggtgcag
gaggtgcagcgtatcgtgcgtccggctaatgcgatgaaagtggtgtacgccagcgatgaa
gagctggttgcccatgaggcgcgcctggatctggtggcgaaaaagggcggcggcaactgc
ctgtggcgcgtagaataa
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