Serratia sp. MYb239: CLM71_04705
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Entry
CLM71_04705 CDS
T05477
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_04705
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLM71_04705
Archaeal homologous recombinant proteins
CLM71_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AVJ16481
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All DBs
Position
complement(1002361..1003590)
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AA seq
409 aa
AA seq
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MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLIAQIEQHQVDALIVAGDLFDTGSPPSYAR
ELYNRFVVELQQTGCQLVVLGGNHDSVATLNESRELLSCLNTRVIASAQAEAGQQIVTLN
RRDGQPGALLCAIPFLRPRDLLTSRAGESGTQKQQALQEAIAEHYLTLYQAACAQREALD
LTLPIVATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQKVAKSEH
IRYSGSPIPLSFDELGSAKSVFMVDFADGRLQQVTTLPVPLFQPMQLIKGDLAQIEQQLQ
QFADYQGELPVWLDIEVATQDYLSDIQRRIQALADNLPVEVVLLRRSKEQRRQAIEQQDK
ETLNELSVDEVFERRLAQESELEEARRGRMRAMFRQTVDALQQNEEPSA
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatacacacctctgactggcatttgggtcagtattttttcaccaaaagccgt
gccgccgagcatcaggcgtttttgcgctggctgattgcgcagattgaacagcatcaggta
gacgcgctgatcgtcgccggggatctgttcgacaccggttcgccgccgagctacgcgcgt
gaactctacaaccgctttgtggtggaactgcagcagaccggctgccaactggtggtgctg
ggcggcaaccacgactccgtggcgacgctgaatgaatcgcgcgagctgctctcctgtctg
aacacccgcgtgatcgccagcgcgcaggccgaggccgggcagcaaatcgtgacgcttaac
cgccgcgacggccagcccggcgcgctgctgtgtgccatcccgttcctgcgcccgcgcgat
ttgctgaccagccgcgccggcgaatccggcacgcagaagcagcaggcgctgcaggaagcc
atcgccgaacattatctaacgctgtatcaggcggcctgcgcgcagcgcgaggcgctcgat
cttacgctgccgatcgtcgccaccggccacctgaccaccgtcggcgtcaccacctcggat
tcggtgcgcgatatctatatcggcacgctggacgccttcccggcgcaggccttcccgccg
gcggactatatcgccctggggcatattcaccgggcgcaaaaggtggcgaaaagcgagcat
atccgttacagcggctcgccgatcccgctcagctttgatgagctgggcagcgccaaaagc
gtgtttatggtcgacttcgccgacggcaggctgcagcaggtcactacgctgcccgtcccg
cttttccagccgatgcagttgatcaaaggcgatctcgcccagatcgaacagcagctgcag
cagtttgccgactatcagggcgagctgccggtgtggctggatatcgaggtggcgacgcag
gattacctcagcgacattcagcgccgcatccaggcgctggcggataatctgccggtggag
gtggtgctgctgcggcgcagtaaagagcagcgccgtcaggccatcgagcagcaggataaa
gagacgttgaacgaactgagcgttgatgaggtgtttgaacgccgtctggcgcaggaaagc
gaactggaagaagcgcggcgcggccggatgcgcgccatgttccgccagacggtcgacgct
ctgcagcagaatgaggagccatcggcatga
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