Serratia sp. MYb239: CLM71_04930
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Entry
CLM71_04930 CDS
T05477
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serm03032
]
CLM71_04930
03036 Chromosome and associated proteins [BR:
serm03036
]
CLM71_04930
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_04930
DNA replication proteins [BR:
serm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CLM71_04930
Chromosome and associated proteins [BR:
serm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CLM71_04930
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CLM71_04930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
UFL1_C
Motif
Other DBs
NCBI-ProteinID:
AVJ16526
LinkDB
All DBs
Position
1053643..1053915
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDAIIASVTDSLKEGDDVALVGFGSFTVRERSARTG
RNPQTGKEIKIAAAKVPAFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataagtcacaactgatcgacaaaattgccgcaggtgctgatatttccaaagcggca
gctggacgtgctttagatgcgattatcgcatccgttaccgactccttgaaggaaggggac
gacgttgctctggttggtttcggttcttttaccgtgcgtgagcgttcagcccgcaccggc
cgcaacccgcagacaggtaaagagatcaaaattgctgctgccaaagtgccggccttccgc
gcaggtaaagcgctgaaagacgcggtaaactga
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