Serratia sp. MYb239: CLM71_05695
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Entry
CLM71_05695 CDS
T05477
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_05695
Enzymes [BR:
serm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CLM71_05695
DNA repair and recombination proteins [BR:
serm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CLM71_05695
Prokaryotic type
CLM71_05695
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CON_HrpB
Neisseria_TspB
Motif
Other DBs
NCBI-ProteinID:
AVJ16663
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All DBs
Position
1204842..1206275
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AA seq
477 aa
AA seq
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MTTHLVWLRNDLRITDNKALHAACSDPQAQVVALFITTPQQWRQHEMAPRQAAFIYANLL
PLQSQLAQRGIPLVVHQCDDFADSVRWLTDYCRTTGVDALFYNRQYELNERRRDRQVETA
LADTLTCHAFDDALLLPPGSVQTGNGEMYQVYTPFRKAFLQRLYSADVRSLPAPAVRASG
AIAPAAAPVPFVDPDAAWDAAAFPPGEEHALRRLRTFCREQVQDYRQQRDFPALDATSGL
SPYLAIGVLSPRQCVNRLRLTCPDLLEQPDGGAFTWLNELIWREFYRHLLVAYPALCRHR
PFIGWTDAVRWNPDAGALQAWQQGRTGYPIVDAAMRQLNNTGWMHNRLRMIVASFLVKDL
LIDWRAGERYFMRQLLDGDFAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGAFI
RKWLPELAEVPDNELHHPHRWAEKQDIALAYPPPIVDHREARLTTLAAFEAAKRGGD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatttggtctggctgcgcaatgatttgcgcatcacggacaacaaggcattg
cacgccgcctgcagcgatccgcaggcgcaggtggtggcgctgtttatcaccacgccgcaa
cagtggcggcagcacgagatggcgccgcggcaggcggcttttatttacgccaacctgctg
ccgctacagtcgcagctggcgcagcgcggtattccgctggtggtgcatcagtgcgatgat
tttgccgactcggtgcgctggcttacggactattgccgcaccaccggcgtcgatgcgctg
ttttacaaccggcagtatgaactgaatgagcggcggcgtgaccggcaggttgaaaccgcg
ctggcggatacgctgacctgtcacgcgtttgatgacgcgctgttgctgccgccgggcagc
gtgcagaccggcaacggtgagatgtatcaggtttatacgccgtttcgtaaggcgtttttg
cagcgtctgtacagcgccgatgtacgctccctgccggcgccagcggtgcgtgcgagcggt
gcgattgcgccggcggcggcgccggttccgtttgttgatcctgatgccgcatgggatgcg
gcggcattcccgccgggtgaggaacacgccttgcgccggctgcgcactttttgccgcgag
caggtgcaggactaccgacagcagcgcgactttccggcgctggacgccaccagcggcctg
tcgccgtatctggcgataggcgtgttatcgccgcgtcagtgcgtcaatcgcctgcggctg
acctgtcctgacctgctggagcagccggacggtggcgcgtttacctggctgaatgagtta
atctggcgtgaattttaccgccatctgctggtggcttatccagccctgtgccgccatcgc
ccctttatcggctggacggacgccgttcgctggaatccggacgccggggcgctacaggct
tggcagcaggggcgcaccggctacccgattgtcgatgcggccatgcggcaactgaataac
accggatggatgcataaccgtttacggatgatcgtggccagttttctggtgaaggatctg
ctgatcgactggcgagccggcgagcgctattttatgcgccagctgctggatggtgatttc
gccgccaataacggcggctggcagtgggcggcgtcgaccggtaccgacgcggcgccttat
tttcgcatctttaatccgacgacgcagggcgaacgttttgatccgcaaggcgcttttatc
cgtaaatggttgcccgaactggcggaagtaccggacaatgaacttcatcatccccatcgc
tgggcggaaaagcaggatattgcgctggcgtatccgccgccgattgtcgatcaccgcgag
gcgcggttgacgacgctggcggcgtttgaggcggcgaaacgcggaggggattaa
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