Serratia sp. MYb239: CLM71_07025
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Entry
CLM71_07025 CDS
T05477
Name
(GenBank) fimbrial protein
KO
K07347
outer membrane usher protein
Organism
serm
Serratia sp. MYb239
Pathway
serm02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CLM71_07025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serm02000
]
CLM71_07025
02044 Secretion system [BR:
serm02044
]
CLM71_07025
02035 Bacterial motility proteins [BR:
serm02035
]
CLM71_07025
Transporters [BR:
serm02000
]
Other transporters
Pores ion channels [TC:
1
]
CLM71_07025
Secretion system [BR:
serm02044
]
Chaperone-usher system
Type 1 pilus assembly protein
CLM71_07025
Bacterial motility proteins [BR:
serm02035
]
Pilus system
Fimbrial proteins
CLM71_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Big_6
Motif
Other DBs
NCBI-ProteinID:
AVJ16898
LinkDB
All DBs
Position
1469416..1471911
Genome browser
AA seq
831 aa
AA seq
DB search
MKQWVPIKALGCKLSVTIVVSACISPAGAAEPQENQQPLYQFNDGFIVGSKEKVDLTRFS
TVAISEGTYSVDVYTNDEWRGRYDLQITRDKQSKLGVCYTAKMLSQFGVAVEKLNEALSK
NPEFCGRLSEWRQDDNLKDNFNQSSLRLDLSVPQIYENRMYKGYVAPEFWDEGVPALNLA
YTANYYNNHVSSAQGSDDSSAYLGINAGFSYDGWLLKHIGNLDWQQQRGSTRWNSNQTYL
QRPIPQMKSIFTGGQFFTNGEFFDSVGLRGVNLATDDNMFPDGMRSYAPEIRGVAQSNAL
VTVRQSGNIIYQTSVPPGPFNINDVYPSGYGNDLEVTIKEADGSEQHFNVPYSSVTQLLR
PGMMRYTFAVGKADADDLRNKPAIVQGTYQYGVNNLFTGYFGVSGFNDYQSVLLGSGINT
GIGALSLDMTQSRLKLKDEDKTGQSFRLSFNRMFSSTQTSIVLAAYRYSTKDYYNLSDAL
YTIDREKSGNNREIWREKNGFSYTVNQDLPEGWGGFYFTGRIADYWNRSGTEKQYQLSYN
NMWGRMTYNVGVQRVYSANNGGNNKDDRISLNFSYPLYFGENRRANLNSNTVFNNSHFGN
SQVGLNGSFGEENNLSYGVTTSVARGGDHNVGLNGSYRAPYSTLTASYSQGEGYRQSGLG
ASGSLIAHGGGVTLSPETGTTMALIEAKDAKGAMLPGSPGTRVDGNGYAVLPYLRPYRIN
AVEINPKGSSEDINFEKTVAQVVPYEGSIVKVKFNTTVEKNLNFRARQSNGEPLPFGADI
VDENGKYIGVVGQGSTLFISSDTAKQAVITWSNGRCTIALNPASTKDAVCQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtgggtgccgataaaagcattgggttgcaagctctctgtgacgatcgtggtt
tcggcttgtatttctccggccggcgcggcggagccgcaggaaaatcaacagccgctgtat
caatttaacgatggctttatcgtcggcagcaaggagaaggtcgacctgacgcgctttagc
accgtagcgatcagcgagggaacctattccgtcgatgtctacaccaacgatgagtggcgc
gggcgttatgacctgcagatcacccgcgataaacagtccaaactgggcgtctgctacacc
gccaaaatgctgtcgcagtttggcgtggcggtggagaaactcaatgaggcgctgagcaaa
aatcctgagttttgcggccgcctgagcgagtggcgccaggatgacaacctgaaagacaac
tttaaccagtcttcgctgcgtctggatctgtcggtgccgcagatctatgaaaaccgcatg
tacaaaggttatgtagcgccggagttctgggacgaaggcgtcccggcgctgaatctggcc
tataccgccaactactacaacaaccatgtctcttccgcgcagggttcagatgactccagc
gcttatctgggcatcaatgcgggtttctcctatgacggctggctgctgaaacacatcggc
aacctggattggcagcagcagcggggcagcacgcgctggaactccaaccagacctacctg
cagcggccgatcccgcagatgaagtcgatctttaccggcggccagttctttaccaacggt
gagttcttcgacagcgtggggctgcgcggggtgaacctggcgaccgacgacaacatgttc
ccggacggcatgcgctcctatgcgccagagattcgcggcgtggcgcaaagcaacgccctg
gtcaccgtgcgccagagcggcaatatcatttatcagacctcggtgccgcccgggccgttt
aacatcaacgatgtgtatccgtccggctatggcaacgatctggaagtgacgatcaaagag
gccgatggctccgagcagcactttaacgtgccttactcgtccgttacccaactgctgcgt
ccgggcatgatgcgctataccttcgccgtcggtaaggccgacgccgatgacctgcgtaat
aagccggcgattgtgcagggcacctatcaatatggcgtgaataacctgttcaccggctat
ttcggcgtcagcggttttaacgactatcagtcggtgctgctgggcagcggtatcaatacc
ggtatcggcgcgctgtcgctggatatgacgcagtcgcgcctgaagctgaaagatgaagat
aaaaccggccagagcttccgcctgagttttaaccgcatgttctccagcacgcagaccagc
atcgtactggcggcgtaccgctactccaccaaggattattacaacctgagcgatgcgctg
tacaccatcgacagggagaagagcggtaataaccgcgaaatctggcgggagaaaaacggc
ttcagctataccgtcaaccaggatctgccggaaggctggggcggcttctactttaccggg
cggattgccgactactggaaccgcagcggcaccgagaagcagtatcagctgagctacaac
aacatgtggggccgcatgacgtataacgtcggcgtgcagcgtgtctactcggccaataac
ggcggcaacaacaaagacgatcgcatttcgcttaacttcagctatccgctgtacttcggc
gaaaaccgccgggcgaacctgaattcgaacaccgtcttcaacaattcgcacttcggcaac
tcgcaggtgggtctgaacggctccttcggtgaagagaacaacctgagctacggcgtgacc
acctcggtggcgcgcggcggcgaccacaacgtcggcctgaacggcagctatcgcgcgcct
tattcgacgctgaccgccagctacagccagggcgaaggctatcgtcagagcggcctgggc
gccagcggctcactgattgcccacggcggcggggtgacgctgtcgccggaaaccggcacc
accatggcgctgatcgaagccaaagacgccaagggcgcgatgctgcccggctcgccgggc
acccgggtggacggcaacggctatgcggtgctgccttatctgcggccgtaccgtatcaat
gcggtggaaattaacccgaaaggcagctcggaagacatcaactttgagaagaccgttgcg
caggtggtgccgtatgagggcagcatcgtgaaggtgaaattcaacaccaccgttgagaag
aacctgaacttccgcgcgcggcagagcaatggcgaaccgctgccgttcggtgcggatatc
gtggacgaaaacggtaaatatattggcgtcgtgggccagggcagcacgctgtttatctcc
tcggacaccgcgaagcaggcggtaatcacctggagcaacggtcggtgcactatcgccctg
aacccggcctcaactaaggatgcggtatgtcagtaa
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