Serratia sp. MYb239: CLM71_07475
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Entry
CLM71_07475 CDS
T05477
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serm03009
]
CLM71_07475
Enzymes [BR:
serm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CLM71_07475
Ribosome biogenesis [BR:
serm03009
]
Prokaryotic type
ribosomal protein modification factors
CLM71_07475
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
AVJ16983
LinkDB
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Position
complement(1575474..1576802)
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AA seq
442 aa
AA seq
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MSNVASKPPKVGFLSLGCPKNLVDSERILTELRNEGYQVVPRYDDAELVIVNTCGFIDSA
VQESLEAIGEALHENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQILSHVHHYVPK
PPHNPFTSLIPAQGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLDSRPIGSVLDEAK
RLVESGVKELLVISQDTSAYGADVKQRTGFWNGQPVKTSMVSLCEQLAGLGVWVRLHYVY
PYPHVDEVIPLMAAGKILPYLDIPLQHASPKILRLMKRPGAVERTLERIKRWREICPELT
LRSTFIVGFPGETEEDFQLLLDFLQQARLDRVGCFKYSPVEGAAANELADPVPEEVKEAR
YHRFMQLQQQISAQRLQEKVGRELLVLIDEVDAEGAIGRSMADAPEIDGAVYLNGETDVN
VGDIVKVKIDHADDYDLWGSRV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtagcaagcaagccgcctaaagttggatttctttcgttaggttgcccaaaa
aacctggtggattcggaacgcatcctcactgaactgcgtaacgaaggctatcaggtggtg
ccgcgttacgatgacgccgagctggtgatcgtcaatacctgcggctttatcgacagcgcg
gtgcaagaatcgctggaagccatcggcgaagcactgcatgagaacggcaaggtgatcgtc
accggctgcctcggcgccaaagaagaccaaatccgcgaagtgcatcccaaggtgttggaa
attaccgggccgcacagctacgagcagattttgtcgcacgttcatcactatgtgccgaag
ccgccgcataacccgttcaccagcctgataccggcgcagggcgtcaaactgacgccgaag
cactacgcctacctgaaaatctccgaaggctgcaaccaccgctgcaccttctgcattatt
ccgtcgatgcgcggcgatctcgacagccgtcctatcggctcggtgctggatgaagccaaa
cgcctggtggagtccggcgtcaaagagctgctggtgatctcccaggacacctcggcctac
ggcgcggacgtcaaacagcgcaccggcttctggaacggccagccggtcaaaaccagcatg
gtcagcctgtgcgaacagctggccggcctcggcgtctgggtgcgtctgcactatgtctac
ccgtacccgcacgtggacgaggtgatcccgctgatggccgccggcaagattttgccgtat
ctggatatccccctgcagcacgccagcccgaaaatcctcaggctgatgaagcgtccgggc
gcggtcgaacgcacgctggagcgcatcaagcgctggcgtgagatctgcccggaactgacg
ctgcgctccacctttatcgtcggcttcccgggggaaaccgaagaggatttccagctgctg
ctcgacttcctgcagcaggccaggctggaccgcgtcggctgcttcaagtacagcccggtg
gaaggcgccgcagccaacgaactggcggacccggtgccggaagaggtcaaagaggcgcgc
taccaccgctttatgcagctgcagcagcagatctcggcgcagcgcctgcaggaaaaagtg
ggccgcgaactgctggtgctgatcgatgaggtcgacgcggaaggtgcgattggccgcagt
atggccgatgcgccggagatcgacggcgcggtgtacctgaacggcgaaaccgacgtgaac
gtgggcgatatcgtcaaggtgaaaatcgaccacgccgacgactatgatctgtggggcagc
cgcgtctga
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