Serratia sp. MYb239: CLM71_07935
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Entry
CLM71_07935 CDS
T05477
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
serm01002
]
CLM71_07935
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
CLM71_07935
Peptidases and inhibitors [BR:
serm01002
]
Cysteine peptidases
Family C82
CLM71_07935
Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CLM71_07935
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AVJ17068
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All DBs
Position
1685399..1687210
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AA seq
603 aa
AA seq
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MLLKESNRVRRLALSCAIACSFAASLPAWATTPGLSAGSSATTVAQSRAELMSALPRGVT
PHYLAALAPLYAANQMQPMWQDRETVQQFQQQLAELAISGIQPQFNQWVKQLTDPAISDM
GRDIVLSDAMLGYLQFVSSISANGNQWLYSNIPYKLATPPATVINQWQLAVRQSKTLPYI
ESLAPQHPQYAKMHQALRDLLTDSRPWPHLASGPTLRPGQTSSDIPALREILQRTGMLSA
SAGNMPQSQEPAMVNSTAPVVDDDQSVDEEKLRENRAAVVSPSSASVSSDEGGMLQSAAS
GDSLYSDELVEGVKRFQKWQGLSADGLIGVRTREWLNVSPQTRAALLALNIQRLRILPGR
VNNGIMVNIPNYSLVYYRDGSEVLSSRVIVGRPSRKTPLMSSALNNVVVNPPWNVPTTLV
REDIVPKAMRDINYFQKHGYTLLSGWSNDAQVIDPSTIDWSSISARNFPYRIRQAPGATN
SLGRFKFNMPSSDAIYLHDTPNHSLFKKDIRALSSGCVRVNKASVLANMLLQDAGWNDSR
VSSTLKQGNTTFVNVRGRIPVKLYYLTAWVADDGQPQFRTDIYNYDNTVRSSAQILSQAE
KLL
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaaagaaagtaacagggtacgacgtttggcgctgagctgcgctatcgcatgt
agttttgccgcgtcactacccgcatgggcaactacgcccggattgtccgcgggttcctcc
gccacgacagtggcgcaaagccgtgcagagctgatgtcggcgctgccgcgcggcgttacg
ccgcactaccttgccgcgctggccccgctgtatgcggccaaccagatgcaaccgatgtgg
caggatcgtgaaacggtgcagcagttccagcagcagctggccgagctggcgatttccggt
attcagccgcagtttaatcaatgggtgaaacagctgaccgacccggcgattagcgacatg
gggcgtgacattgtgttgtcggatgcgatgcttggctatttgcagtttgtctcttccatc
agcgccaacggcaatcaatggctgtacagcaatattccttataagctggccacgccgccg
gcaaccgtgattaaccagtggcagctggcggtgcgccagagcaaaacgctgccttatatt
gaatcactggcgccgcagcatccgcaatacgcgaagatgcatcaggcgctacgtgacctg
ctgaccgacagccgtccttggccgcatctggccagcggcccgacgctgcgtccggggcaa
accagcagcgacatccccgcgctgcgtgaaattctgcagcgcaccggcatgttgtccgca
agcgctggcaacatgccgcagagtcaggagccggcaatggtgaatagcaccgcgccggtg
gtggatgatgaccagtcggttgatgaagaaaagctgcgcgagaaccgtgctgcggtggtg
agtccatcatcggcgtcggtgagctcggatgaaggcggcatgctgcagtccgccgccagc
ggcgacagcctgtacagcgacgagctggttgaaggcgtcaaacgcttccagaaatggcag
gggctgagtgcggatggtctgatcggggtgcgcacgcgtgaatggctgaacgtgtcgccg
caaacccgtgccgcattgctggcgctgaatattcagcgtttgcgtattctgccggggcgg
gtgaacaacggtattatggtgaatattcccaactactcgctggtttattatcgtgatggg
agtgaagtgctttcgtcgcgggtaatcgtcggccgtccaagtcgtaaaacgccattgatg
agcagcgcgctgaataacgtggtggttaacccgccgtggaatgtgccgacgacgctggtg
cgtgaagatattgtgccgaaggcgatgcgtgatattaattacttccagaaacacggctat
acgctgttgtccggctggagcaatgatgcgcaggtgattgatccgtcaacgattgactgg
agttcgatctccgcccgtaatttcccgtatcgtattcgtcaggcgccgggtgccactaac
tcgctgggccgttttaaatttaatatgccaagttcggatgctatttatctgcatgacacg
ccgaatcacagcctgtttaaaaaagatattcgtgcgctcagttccggctgcgtacgggta
aataaagcctcggtgttagccaatatgttgttgcaggatgccggttggaacgatagccgt
gtttcttccaccctgaagcagggcaataccactttcgttaatgtacgagggcgtattccg
gttaaattgtattatttaacggcgtgggttgccgatgacggacagccacaattccgtaca
gatatttacaattacgataatactgtgcgatcgagcgcacaaattttgtcccaggcagaa
aaattgctgtaa
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