KEGG   Serratia sp. MYb239: CLM71_08155
Entry
CLM71_08155       CDS       T05477                                 
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
serm  Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:serm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:serm02044]
    CLM71_08155
Secretion system [BR:serm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CLM71_08155
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: AVJ17107
LinkDB
Position
1734949..1736496
AA seq 515 aa
MLMSVKNENAAGGENVVLERPQAGGVYASLFEKINLNPVASLSALDSWQDNQIMSDATAD
ERVTAAMQIFLERLKQSGTRVEKLDKTLLDHHIAELDQQISRQLDAVMHHEDFQRVESLW
RGMKSLVDKTDFRQNVKIELLDLSKDDLRQDFEDAPEIVQSGLYLQTYVAEYDTPGGEPI
GALISAYEFDASAQDIALLRNISKVSAAAHMPFIGSAGPKFFLKDKMEDVAAIKDIGNYF
DRAEYLKWKAFRETDDARYIGLVMPRVLGRLPYGPDTVPVRSFNYVEEVKGPDHDKYLWT
NASFAFAANMVRSFINNGWCVQIRGPQAGGAVQELPIHLYDLGTGNQVKIPSEVMIPETR
EFEFANLGFIPLSYYKNRDYACFFSANSAQKPALYDTADATANSRINARLPYIFLLSRIA
HYLKLIQRENIGTTKDRRLLELELNTWVRSLVTEMTDPGDELQASHPLRDARVAVEDIED
NPGFFRVKLYAVPHFQVEGMDVNLSLVSQMPKAKA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgctgatgtctgtaaaaaatgaaaatgctgccggcggcgaaaacgtggtgttggaacgt
ccgcaggcgggcggtgtgtatgcgtccctgtttgaaaaaatcaacctgaacccggtggcg
tcgctgagcgcgctggacagctggcaggataaccagattatgtccgacgccacggcggac
gaacgcgtcaccgccgcgatgcagatctttctggagcgtctgaagcagtccggcaccagg
gtggaaaagctggacaaaaccctgctggatcaccacattgccgaactggatcagcaaatc
agccgccagctggacgcggtgatgcaccacgaagacttccagcgggtggaatccctgtgg
cgcggcatgaagtcgctggtggacaaaaccgatttccgtcagaacgtcaaaatcgaactg
ctggatctgtcgaaagacgatctgcgccaggactttgaagacgcgccggaaattgtacaa
agcgggctttacctgcagacctacgtcgccgaatacgacacgccgggaggcgagccgatc
ggcgcgctgatctccgcctatgagttcgacgcctccgcccaggatatcgcgctgctgcgc
aatatctccaaggtgtccgccgcggcgcatatgccgtttatcggttccgccgggccgaaa
ttcttcctgaaagacaagatggaagacgtcgccgcgattaaggatatcggcaactacttt
gaccgcgccgaatacctcaagtggaaagccttccgggaaaccgatgacgcgcgttatatc
ggcctggtgatgccgcgggtgctgggccgcctgccgtatggcccggacaccgtgccggtg
cgcagcttcaactatgtggaagaggtgaaagggccggaccacgataaatacctgtggacc
aacgcctccttcgcgttcgccgccaatatggtgcgcagctttatcaacaacggctggtgc
gtgcagatccgcggcccgcaggcgggcggcgcggtgcaggagctgccaatccatctctac
gatctgggcaccggcaaccaggtgaaaatcccgtcggaagtgatgatcccggaaacccgc
gaatttgagttcgccaacctgggctttatcccgctgtcgtactacaaaaaccgcgactac
gcgtgcttcttctccgccaactccgcgcagaagccggcgctgtacgacaccgcggacgcc
accgccaacagccgcatcaacgcgcggctgccgtacatcttcctgctgtcgcgcattgcg
cactacctgaagctgatccagcgcgaaaacatcggcaccaccaaggatcgccgtctgctg
gagctggagctgaacacctgggtgcgcagcctggtgaccgaaatgactgacccgggcgat
gagctgcaggcttcgcacccgctgcgcgacgccagggtggcggtggaagatatcgaagac
aacccgggcttcttccgcgtgaagctgtatgcggtgccgcacttccaggtggaagggatg
gacgtcaacctgtcgctggtatcccagatgccgaaggcgaaagcataa

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