Serratia sp. MYb239: CLM71_10955
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Entry
CLM71_10955 CDS
T05477
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00550
Peptidoglycan biosynthesis
serm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM71_10955
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
serm01002
]
CLM71_10955
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
CLM71_10955
Enzymes [BR:
serm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLM71_10955
Peptidases and inhibitors [BR:
serm01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
CLM71_10955
Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CLM71_10955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AVJ20066
LinkDB
All DBs
Position
2283947..2285116
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AA seq
389 aa
AA seq
DB search
MKPSVLAVVCGMLLPLAAQAAATPAQVPALTPPPIDAASYVLMDYTTGQILAQDHADERR
NPASLTKLMTGLVVDHALDQHKIGLDDVVTVGQDAWGAGNPVFKGSSLMFLKPGDRVTVR
DLSRGIIIDSGNDACVAMADYVAGSQAAFVQLMNQKAAQLGLKNTHFETVHGLDAPGQFT
TAGDLAQISRAIIMSEPAEYHMYSEKSLTWNGITQQNRNGLLWDKTLHVDGLKTGHTASA
GFNIIASATEGNRRMIAVVMGGKSSKGREEQARKLLTWGLRDFDTVQVFKAGAALGNETV
WYGDKSQVQVGVQQDHALSLPKGEVQKLKAQYVLNGKRLEAPLKAGQTVGEVRISDDGKL
LETLPLVALQPVNQGGIFSRLVDYIKLKV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcctagtgtattggccgttgtatgtggaatgttactgccgctggcagcccaggcg
gcagcaacgccggcgcaggttcctgcgctgaccccgccgccaatcgatgcggcttcgtac
gtattgatggattataccaccggccagattttggcgcaggatcatgctgacgagcggcgc
aatcccgccagcctgactaaactgatgaccggcctggtggtcgaccacgctctcgatcag
cacaaaattgggctggatgacgtggtgacggtgggccaggacgcctggggcgccggcaac
ccggtatttaaagggtcctcgctgatgttcttaaagccaggtgacagggtcacggtgcgc
gatctcagccgtggcattatcattgactccggcaatgacgcctgcgtggcgatggccgat
tacgtggccggcagtcaggcggctttcgtacagttgatgaaccagaaagcggcgcagctc
gggctgaaaaacacccactttgaaacggtgcacggcctggatgcgccgggtcagttcact
accgccggggatttggcgcagatatcgcgggcgatcatcatgagcgaaccggcggaatat
catatgtacagcgaaaaatcgctgacctggaacggcatcacgcagcagaaccgcaacggc
ctgctgtgggataaaacgctgcacgttgacggcctgaaaaccggccatacggcgtcggcg
ggctttaacattattgcctccgccaccgaaggcaaccgccgtatgattgccgtggtgatg
ggcggtaaaagctcgaaagggcgtgaagagcaggcgcgtaaactgctgacctgggggctg
cgcgactttgacaccgtgcaggtgttcaaggccggcgccgcactgggcaatgagacggtc
tggtacggcgataagtcgcaggtgcaggtcggcgtccagcaggatcacgcgctcagtctg
ccgaagggcgaggtgcagaagcttaaggcgcagtacgtgctgaacggcaaacggctggaa
gcgccgctgaaggcgggccagaccgtcggcgaagtacgcatcagcgacgacggtaaactg
ctggaaacgctgccgctggtggcgctgcagccggttaatcagggcgggatcttctcgcgg
ctggtggactacataaaactcaaagtataa
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