Serratia sp. MYb239: CLM71_11380
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Entry
CLM71_11380 CDS
T05477
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00550
Peptidoglycan biosynthesis
serm01100
Metabolic pathways
serm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CLM71_11380 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLM71_11380 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
CLM71_11380 (mrdA)
Enzymes [BR:
serm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CLM71_11380 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
serm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CLM71_11380 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AVJ20075
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All DBs
Position
2370336..2372216
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AA seq
626 aa
AA seq
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MLFVRRAGVALLVVVACFGALIYNLYRLQVKQHDFYQTRSNQNDIKMVPIAPSRGLIYDR
NGVPLVRNLTLYQLQVIPSKIANMSALLQALTPIVDLTPDDISSFRDQMAHTSRYKPVTL
KSELSETEVARFAVNQYRFNGVTVDSYQQRQYPYGAQLAHVVGYVSKINDRDIKRLTENG
EMENYAADHNIGKQGIEGYYEKALHGVTGYREVEVDNHGRIVRLLKEQPPQAGKNIYLTL
DVRLQQYIESVLKNQRAAVVVEDPRDGGILAMVSSPSYDPNPFVKGISYKSYKSLLSNPD
LPLINRATQGLYPPASTVKPYMALSALFSGVITPSTTYFGAPTWTLPGTKRRYRDWLKSG
HGMLNVTKAIEESADTFFYQVAFDLGIDRIHSWLSQFGYGKPTGIDLNEEYNGVLPSREW
KQRVHKKTWYQGDTISVGIGQGYWIATPIQMVKALTILLNNGKVKNPHLLYSMKRGAQIN
RYQQPAPSAQVGDPNSPYWGIVRNGMYGMANLPNGTGYKLFHSAPYHIAAKSGTSQVFGL
KENQTYNAKMIPVRLRDHIFYTLFAPYQHPKVAMALILENGGGDGVVAGPTARAILDHIF
DPANAPPAGEPEKVKAPMSDSADVQQ
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttgtccgccgcgccggcgtggcgttattggtcgttgtggcctgcttcggcgcg
ctgatttacaacctgtaccgcctgcaggtgaaacaacacgatttctatcagacgcgttcc
aaccagaacgatatcaaaatggtgccgattgcccccagccgcgggctgatctatgaccgt
aacggcgtgccgctggtacgcaatctcaccctgtaccaactgcaggtcattcccagcaaa
atcgccaatatgtcggcgctgctgcaggcgttgacgccgatcgtcgatttaacgccggac
gatatcagcagtttccgcgatcagatggcgcacaccagccgctataagccggtaacgtta
aaaagcgaactgagcgaaacggaggtggcgcgctttgccgtcaaccaataccgcttcaac
ggcgtcacggtcgacagctatcagcagcggcagtatccctacggcgcgcagctggcgcac
gtggtgggctatgtgtcgaaaatcaacgatcgcgacatcaaacggctgactgaaaacggg
gagatggagaactatgcggccgaccacaatatcggtaagcagggcatcgaaggttattac
gaaaaggcgctgcacggcgtcaccggctatcgggaagttgaagtggataaccatggccgc
atcgtgcggctgctgaaagaacagccgccgcaggccggtaaaaacatctacctgacgctg
gatgtgcgcctgcaacagtacatcgaatcggtgctgaaaaaccagcgtgcggcggtggtg
gtggaagacccgcgcgacggcggcattctggcgatggtctccagcccgagctacgatccc
aacccgtttgtgaagggcatcagctacaaatcatataaatcgctgctgtccaaccccgat
ctgccgttgattaaccgcgccacccaggggttgtatccgccggcgtcaacggtgaagccc
tatatggcgctgtccgccttattctccggcgtgatcacgccgagcaccacctatttcggc
gcgccgacctggacgctgcccggcaccaaacgccgctaccgcgactggttgaaaagcggc
cacggcatgctgaacgtcaccaaggcgattgaggaatccgctgataccttcttctatcag
gtagccttcgatctggggatcgaccgcattcacagctggctgagccagttcggctacggc
aaaccgaccggcatcgacctgaacgaagagtacaacggcgtgctgccgagccgcgaatgg
aaacagcgggtgcataaaaagacctggtatcagggcgacaccatttcggtgggcatcggc
cagggctactggatcgccacgccgattcagatggtcaaagcgctgaccattttgctcaat
aacggcaaggtgaaaaatccgcatctgctgtattcgatgaagcgcggcgcgcagataaac
cgttatcagcagccggcgcccagcgcgcaggtcggcgatcccaactcgccgtactggggc
atcgtgcgtaacggcatgtacggcatggccaacttgcccaacggcaccggctataaactg
ttccacagcgcgccttaccacatcgccgccaaatcaggcacctcgcaggtgttcgggctg
aaggagaaccagacctataacgccaaaatgatcccggtgcggctgcgcgaccatattttc
tacaccctgtttgcgccgtaccaacatccgaaagtggcgatggcgctgattttggaaaac
ggcgggggagacggcgtggtggccgggccgaccgcgagggcgatcctcgaccatattttc
gacccggccaacgcgccgccggccggcgagccggaaaaagtgaaagcgccgatgagcgac
agtgctgatgtgcaacagtaa
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