Serratia sp. MYb239: CLM71_12995
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Entry
CLM71_12995 CDS
T05477
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00061
Fatty acid biosynthesis
serm00071
Fatty acid degradation
serm01100
Metabolic pathways
serm01212
Fatty acid metabolism
serm02024
Quorum sensing
serm04146
Peroxisome
Module
serm_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CLM71_12995
00071 Fatty acid degradation
CLM71_12995
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CLM71_12995
09145 Cellular community - prokaryotes
02024 Quorum sensing
CLM71_12995
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
serm01004
]
CLM71_12995
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
serm04147
]
CLM71_12995
Enzymes [BR:
serm01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CLM71_12995
Lipid biosynthesis proteins [BR:
serm01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CLM71_12995
Exosome [BR:
serm04147
]
Exosomal proteins
Exosomal proteins of breast milk
CLM71_12995
Exosomal proteins of breast cancer cells
CLM71_12995
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AVJ17984
LinkDB
All DBs
Position
complement(2707672..2709360)
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AA seq
562 aa
AA seq
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MEKVWLKRYPADVPAEIDADRYPSLVEMFENAVQRYADQPAFINMGEVMTYRKLEERSRA
FAAYLQNELGLNKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GASAIVIVSNFAHTLEKVVFKTQVKHVILTRMGDQLSAAKGTLVNFVVKYVKRLVPKYDL
PDAISFRTALQRGRRLQYVKPDIINSDLAFLQYTGGTTGVAKGAMLTHRNMQANLEQAKA
AYAPLFRAGQELVVTALPLYHIFALTVNCLLFIDLGGRNLLITNPRDIPGLVKELAKYPF
TALSGVNTLFNALLNNEEFLKLDFSTLRFSVGGGMAVQKAVADKWEQTTGKHLLEGYGLT
ECAPLVAGNPYDLQHYSGSIGLPVPSTDVRLVDEQGEDVAMGEPGELWVKGPQVMLGYWQ
RPDATDEVLKDGWLATGDIVTVDEQGFIRIVDRKKDMILVSGFNVYPNEIEDVVSQHAKV
LECAAIGVPSEASGESVKICVVKKDPSLTKDELLTHCRRHLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQTNAKAADAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaggtctggttaaaacgttatccggcagatgtgccagcagagattgacgccgat
cgctatccgtctttggttgaaatgtttgaaaatgccgtacagcgttatgcggatcaacca
gcatttatcaatatgggcgaggtgatgacctaccgcaagttggaagagcgcagccgggca
ttcgccgcctacttgcaaaatgagctggggttgaataaaggcgaccgtgtcgctttgatg
atgccaaacctgctgcagtacccgattgcgctgttcggcattctgcgggccggcatggtg
gtggttaacgtgaacccgctgtatacgccgcgcgaattggagcatcagctcaacgacagc
ggcgccagcgctattgtcatcgtctccaactttgcccatacgctggaaaaggtggtcttc
aaaacccaggttaagcatgtgatcctgacgcggatgggggatcagctctcggcggccaaa
ggcacgctggtcaactttgtggtgaagtatgtcaaacgcttggtgccgaagtacgacctg
ccggacgccatctctttccgtacggcgctgcagcgcggccgacgtctgcaatatgtaaaa
ccggacatcattaacagcgatttggcttttttgcagtacaccggcggcaccaccggggtg
gcgaaaggcgcgatgctgacccaccgcaatatgcaggccaatctcgaacaggccaaggcg
gcttatgcgccgctgttccgtgccggacaagagctggtggtgaccgcgctgccgctgtat
cacatttttgcgctgacggtgaactgcctgctgtttatcgatcttggcggccgtaacctg
ttgatcactaatccgcgcgatatccccggcctggttaaagagctggccaaatacccgttt
accgcgctgagcggcgtcaataccctgttcaatgcgctgctgaataacgaggagttcctc
aaactggacttttcgacgctgcgtttttcggtggggggcggtatggcggtgcaaaaggcg
gtggcggataagtgggagcagaccaccgggaagcacctgctggaaggctatggcctgacc
gagtgcgcgccgctggtggccggcaacccgtatgatttgcagcattacagcggcagtatc
gggttaccggtaccgtcgaccgatgtgcgcctggtggatgagcagggggaagacgttgcc
atgggcgaaccgggtgaactgtgggtcaaagggccgcaagttatgttaggctattggcaa
cgtcccgacgccacggatgaagtgctgaaagacggctggctggcgaccggcgatatcgtc
acggtggatgaacaaggctttattcgcatcgtcgatcgtaaaaaagatatgattttggta
tcgggttttaacgtttatccgaatgaaattgaggatgtcgtcagtcagcatgctaaagtg
ctggagtgcgcggcaattggcgtgccgagcgaagcctccggcgagagcgtgaaaatttgc
gtggtgaagaaggatccttcgctgaccaaggacgagttgctgacccattgccgtcggcac
ctgaccgggtataaagtgcctaaaattgttgagttccgcgacgagttgccgaaatcgaac
gtcggcaaaattctgcgacgcgaactgcgtgacgaacagacaaatgccaaggcggccgat
gccgcctga
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