Serratia sp. MYb239: CLM71_13080
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Entry
CLM71_13080 CDS
T05477
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLM71_13080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_13080
Enzymes [BR:
serm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLM71_13080
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLM71_13080
RecFOR pathway proteins
CLM71_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_16
AAA_3
AAA_14
AAA_2
Rad17
TIP49
nSTAND3
AAA_18
RNA_helicase
AAA_28
AAA_17
NTPase_1
NB-ARC
AAA_24
ABC_tran
Bac_DnaA
bpMoxR
Sigma54_activ_2
TsaE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AVJ17998
LinkDB
All DBs
Position
complement(2726151..2727155)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLISAEPITEEEVIDRAIRPKMLAEYVGQPHVREQMEIFIQAARLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
AVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYQVADLEHIVSRSASCLGLTLSPDGAHEVARRARGTPRIANRLLRRVRDFAEVRADG
QMTGEVAAQALNMLNVDAEGFDYMDRKLLLAIIDKFTGGPVGLDNLAAAIGEERETIEDV
IEPFLIQQGFIQRTPRGRMATNHAYKHFGIEREE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgaccgcctgatctcagccgagccgatcacggaagaagaggtgatcgat
cgcgccatccgccccaaaatgctggcggagtacgtgggccaaccgcacgttcgcgagcag
atggaaatctttattcaggcggccagactgcggggcgacgcgctcgatcacctgctgatt
ttcgggccgccggggctggggaaaaccacattggccaatatcgtcgccaatgaaatgggt
gtcaacctgcgcactacctccggtccggtgctggaaaaggccggcgatctggcggcgatg
ctcaccaaccttgaaccgcacgacgtgctgtttatcgatgagattcaccggctgtcgccg
gcggtggaagaggtgctgtacccggcgatggaagactatcagctggatattatgatcggc
gaagggccggcggcgcgttcgatcaaaatcgatctgccgcctttcaccctggtcggcgcc
accacccgcgccggctcgctgacctcgccgctgcgcgatcgcttcggcattgtccagcgg
ctggagttctatcaggtggccgatctggagcacatcgtctcgcgcagcgccagctgcctg
gggctgacgctgtcgccggacggcgcacacgaggtggcgcgccgggcgcgcggtacgccg
cgtatcgccaaccgcttattgcgccgggtgcgggatttcgccgaggtgcgggccgacggc
cagatgaccggcgaagtcgcggcgcaggcgctgaatatgctgaatgtggatgcggaaggg
ttcgactatatggaccgtaagctgctgctggcgattatcgataagtttaccggcgggccg
gtagggttggataacctggcggcggcgattggcgaagagcgtgaaacgattgaagacgtg
attgagccgtttctgattcagcaaggctttattcagcgcacgccgcgcggacgcatggcg
accaaccatgcctataagcatttcggtattgagcgcgaagagtga
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