KEGG   Serratia sp. MYb239: CLM71_14290
Entry
CLM71_14290       CDS       T05477                                 
Symbol
icmF
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
serm  Serratia sp. MYb239
Pathway
serm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:serm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    CLM71_14290 (icmF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:serm02044]
    CLM71_14290 (icmF)
Secretion system [BR:serm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   CLM71_14290 (icmF)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF6384
Other DBs
NCBI-ProteinID: AVJ18222
LinkDB
Position
2972912..2976559
AA seq 1215 aa
MLSTLFSIITSRLLWGFAGISAMAFIIWMIGPLVAIGDYRPLEPELNRIITIAVIYLIWV
LCRIVPRIYSAWFNRKLLSNLRASEQAPADDADAKAEPQQDQLLAQRFDEAAQLLKKARF
APGQGDKHRWMTRFSRQYLYQLPWYVIIGAPGAGKTTALVNSGLHFPLADRFGKSALRGV
GGTRNCDWWFTNDAVLLDTAGRYTTQESQREEDAGEWKSFVNLLKKYRTRQPINGVMVTI
SVADLMTESAEARNAQASALRKRLIELHEQLGIHFPVYVMVTKTDLLNGFMAYFSGFDKA
QRDQIWGFTFPYERSRQPDFNLSGEFEQQYTLLQQRLDAALPDTLLVEHDARQRSESYLF
PQEFAALRPLLAQYLDVVFATSSFETRFTPRGIYFTSGTQEGLPFDRVMGELNRYLQLPS
AGNGQRNGAQTSWDSVNDDAPIPAAKGQSFFLKETLETVIFQESGLAGSNRWWEYRNRAL
HWAGYIALAVVLAILGIFWFTSYGNNKAYLAEVSAKAPSVERQGQGLTQLNSGDMFALLP
FLNSVLHLPDSQNFSLDDPPFTYRMGLYRGDQVSDASNALYQKTLQELLLPQVAQQIATT
LRNDNHSDADFSYEALKAYQMLYLPKQYDGKFLRAWVMLNLQRNLPQGSTQKQLQQLEWH
LSQLLDGQIQASPYAKDEALVSQAQAAINRAPLSQRVYGRLKRLLLNQTEIKPVRLVDLA
GPQTELAFSRKSGKPITDGIPGLFTPQGYWKAFDSNIDKVTDTLRQEDVWVLNTQTPEQK
SADLTKTVRQLYMQDFIAVWDELLGDIQLAHIGNLTQRISSARLLSGNPSPMRNLLVNVG
KNVTLREEKEGEEARSLANKAGESINQSANRTLEALFTNRPSNADGDVSAQPEQVVMAHF
APLLELAQGQGEGSKAIVFDGVLKQVDELYSYLTAVQGAANSGMSAPPSDVIPRLQAESG
RLPTPFKQMLLSLAIGASSDTQRKEMENVKKRISFEVGSFCRQAIAGRYPLSSRSKRDVT
PDDLARMFAPNSGLMDSFFRENLQGKVDTTRANWRFTPGVDGKTLPGGEGILRSFQQAQR
IRDAFFANGTATPSYRVTVRPVRMDNDILNMTLDIDGQLFKYSHGPLVPLVVSWPGTRNT
NQVHLQLALANGTTASLLTSGPWALNRMVDMASLSAGGSSLSRQATFNLDGHRVTLEFTA
NSIRNPFQLPAFSCP
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgcttagtacgttattctccatcatcaccagccgcctgttatggggttttgccggcatc
agcgccatggcgttcatcatctggatgatcggcccgctggtggccatcggcgattaccgt
ccgctggagccggaactgaaccgcatcatcactatcgcggtgatctatctgatttgggtg
ctgtgccgcattgtgccgcgcatctacagcgcctggttcaaccgtaagctgctcagcaac
ctgcgcgccagtgagcaggcgccggccgacgacgccgacgccaaggcggagccgcagcag
gatcaactgctggcgcagcgctttgacgaagccgcccaactgctgaaaaaagcgcgtttt
gcccccggccagggggataaacaccgctggatgacccgcttcagccgccagtatctgtat
cagttgccctggtatgtgattatcggcgcgccgggcgcagggaaaaccaccgcgctggtg
aactccggcctgcacttcccgctggcggatcgcttcggcaaatcggcgctgcgcggcgtc
ggcggcacccgcaactgcgactggtggttcaccaacgatgccgtgctgctggacaccgcc
ggccgttacaccactcaggaaagccagcgggaagaagacgccggcgaatggaaaagcttc
gtcaacctgctgaagaaataccgcacccgccagccgatcaacggcgtgatggtgaccatc
agcgtcgccgacctgatgacggaaagcgccgaagcacgcaatgcgcaggccagcgccctg
cgcaaacggctgattgaactgcacgaacagctgggcatccacttcccggtgtatgtgatg
gtgaccaaaaccgacctgctcaacggttttatggcctacttcagcggctttgacaaagcg
cagcgcgaccagatctggggattcaccttcccgtatgagcgctcgcgccagcccgacttc
aacctcagcggcgaatttgagcagcagtatacgctgctgcaacagcgtctcgacgcggca
ctgccggatacgctgctggtggaacacgatgcccgccagcgctcggaaagttacctgttc
ccgcaggaattcgccgcactgcgaccgttgctggcgcagtacctggacgtggtgttcgcc
acctccagctttgaaacgcgcttcacgccgcgcggtatttactttaccagcggcacccag
gaaggcctgccgttcgaccgggtgatgggcgaactgaaccgctatctgcaactgccgtca
gccggcaacggccagcgcaacggcgcgcagacctcctgggacagcgtcaacgacgatgca
ccaatcccggcggccaaagggcaaagcttcttcctgaaagagacgctggaaacggtgatc
ttccaggagtccgggctggccggcagcaaccgctggtgggagtaccgcaaccgtgcgctg
cactgggccggttacatcgctctggcggtggtgctggcgattctggggattttctggttc
accagctacggcaataacaaggcctatctggccgaagtctccgccaaggcgccgtcggtg
gagcgtcagggccaggggctgacccagctgaactccggcgatatgttcgccctgctgccg
ttcctgaacagcgtgctgcatctgccggacagccagaacttttcgctggacgatccgccg
ttcacctaccgcatggggctgtatcgcggcgatcaggtcagcgacgccagcaacgcgctg
tatcagaaaacgctgcaagagctgctgctgccgcaggtggcgcaacagatcgccactacc
ctgcgcaacgataaccacagcgacgccgatttcagctacgaagcgctgaaggcttaccag
atgctgtatctgccgaagcagtacgacggcaaattcctgcgcgcctgggtaatgctcaac
ctgcagcgcaatctgccgcagggcagcacccaaaaacagctgcagcagttggaatggcac
ctgagccagttgctcgacggccagattcaggcttcgccttacgccaaggatgaggcgctg
gttagtcaggcgcaggccgccatcaaccgcgctccgctgtcgcagcgcgtgtatggtcgt
ctgaagcgtctgttgctgaatcagaccgagattaaaccggttcgtctggtggatctcgcc
ggcccgcaaaccgagctggcgttctcgcgcaaaagcggcaagccaatcaccgacggcatc
cccggcctgtttacgccacagggatattggaaagcgttcgacagcaatatcgacaaagtg
accgatacgctgcgccaagaagatgtctgggtgctgaacacccagacgccggagcagaaa
agcgccgatctgacgaaaaccgtacgtcagctctatatgcaggattttatcgccgtctgg
gatgaactgctgggcgatattcagctggcccacattggcaacctgacgcaacgcatcagc
agcgcacgcctgctgtccggcaacccgtcgccgatgcgcaacctgctggtcaacgtcggt
aaaaacgtcacgctgcgggaagagaaagagggtgaggaagcacgctcgctggcgaataaa
gccggcgaatccatcaaccagagcgccaaccgtacgctggaagccctgttcaccaaccgc
ccgagcaacgccgacggcgacgtctccgcccagccggaacaggtggtgatggcgcacttc
gcacctctgctggaactggcccagggccagggcgaaggcagcaaagcgattgtgtttgac
ggcgttctgaaacaggtcgacgagctgtacagctatctgacggcagttcagggtgcggcc
aacagcggcatgtcggcgccgccgagcgacgtgatcccacgcctgcaggcggaatccggc
cgtttgccgacgccgtttaaacagatgctgttatcgctggcgatcggcgccagcagcgat
acccaacgcaaggagatggagaacgtaaaaaagcgcatcagctttgaggtcggcagcttc
tgccgacaggcgatagctggccgctatcccctctcctcgcgttcaaaacgagacgtcacg
ccggatgacctggcgcgcatgttcgcgcccaacagcgggctgatggacagcttcttccgt
gaaaacctgcagggcaaagtggacacgacccgcgccaactggcgtttcaccccgggcgtc
gatggcaaaacgctgccgggcggcgaaggtatcttgcgttcgttccagcaggcgcagcgt
attcgcgacgccttctttgccaacggcaccgctacgccgtcgtaccgcgtgacggtgcgt
ccggtgcggatggataacgatattctcaatatgacgctggatattgacgggcagctgttc
aaatacagccatggtccgctggtgccgctggtggtcagttggccgggcacccgtaatacc
aatcaggtgcacctgcagctggcgctggcgaacggcaccaccgccagcctgctgaccagc
ggcccctgggcgctgaatcgcatggtcgatatggcgagcctgtcggccggcggcagcagc
ctgagccgtcaggcgacgtttaacctcgacggccaccgcgtcacgctggaattcaccgcc
aacagtatccgcaatccgttccagctgccggcattctcttgcccgtag

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