Serratia sp. MYb239: CLM71_14415
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Entry
CLM71_14415 CDS
T05477
Name
(GenBank) type IV secretion protein Rhs
Organism
serm
Serratia sp. MYb239
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
AHH
DUF6531
PAAR_motif
RHS
HNH_2
Motif
Other DBs
NCBI-ProteinID:
AVJ18247
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All DBs
Position
3000412..3005016
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AA seq
1534 aa
AA seq
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MSDLTAASLGDPLVHSSLLADFVSGLVEGAIYAGIYAGATALISSGLGAPVGFALVAGAM
VSGIPEKIGTAAGALVDTLIGTGPPDAFITSGSDNVHMNGKPAARAAGTVDHDFLNSPDV
GAEEGPGLIDSALAVAGGIISSVMHPGPLIDKIASIDGESVKNWLGDVWDDITQPTVESA
SPYATPANKDTVACTKGHMAENVNFLAEGSKKVLINGHPAARNGDRSTCEAKIEVADNPR
VRIGGDGIVVRDIRSGKNALAYFAGGLIGGLGKQGLALGQSLFRRVMPRLALKDAGCALA
AVAAADLAGNAAGAAVGTTLVAATQTGHPVHIPTGAKILAGEEELDFTLPDRIPLYWQRL
YNSRNRAAGMLGVGWMLPFETRLLRMLDDNGQPQFILRDASGRETGLGNVTPGDVIRFTE
DGFTLYCSLQGVMLLQTAEGEHQLYEPDPARVGEWRIARIYDRHENCHHFAWNSAGQLVT
ISSDNQALDVELSYDARNGRLLAVHQHVGQEKRLLVQYDYNPQGQLIAVRDADAIVTRRY
GWDDASGLLAWHSYATDLRVSYRWQRAADGDHWRVSEYQVLDAQLQCLEHWLLEADEAAR
RASVTCLSGGTTEHRWDSLLRITDYTDSYGARWRFRWAALRENLSAVITPDDQRWELGYD
ERGNLILVRDPLGNTTHTTWHPAWALPLKEVLPDGACWQYRYNPFGDVVEMTDPLGNVSR
FTWNDQGDLLTRTDPLGNTQQFWWNALGQLTRDEDCSGHQSRREYDDAGNLLRTCDAEGN
ATRYRWSAAGRLQALVRPDGRETRYDYDHAGLPCRENIDAFSERRVERNVRGQITCAVDP
AGIETRYQYDRFGRLTALVNPNNERWQFDYDAGHRLLAQSDFAGRRRQYRYNPLGQVSAI
TEYPLAQDGDAAQPLHTRLSYDALGRLTAKETADSRTEYRYQARTLEVRRTPLALWQQAQ
ACGEQPDWPETLRFSRDAAGNLCAEENHSGLWQHSHDPLGNLSATHMPDGSTLSQLRYGS
GHLLQTALQTAGQRLDIAGWQRDKLHREVTCTLGEVTQETRYDSVGRITLRRASSERSHP
LVFERRYQWDRQDLVVQQKLIENDNLTDGPQFQQRRFGYDARGQLTHSILPQREERFYYD
PAGNRSDGPAVTVWRNLLQRLNGHRWGYDGFGRLSWRRDGNTGVEQRFQYDAEHRLTAVT
FDGDSRYQRAEYRYDALGRRTRKTLYPHHGEPQTTLFHWNGLQMVGEHSPDQPQRSIQYL
YKEDSYEPLARVDRHGDSSEVYWYHSELNGLPERMTDAQGKVVWHGRFSAWGATDAESGT
LATAQNLRYQGQYLDRETGLHYNLFRYYDPNCGRFTQSDPIGLAGGVNTYAYTPDPISWV
DPLGLSGCSTTLGKNMMAKMGLPRSTSWKGYQAHHIIPKELANHPALKKIGYYIDDAKNG
IFLRKKDEATSAMARHQGNHSGYTKSVEGALDKIDLNQSKDIISQQVAEIQNIARKGLQN
GYPIRPLDMDVSGGSLGNAKVNLLWVKIFNTGGW
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatttaaccgccgcgagtctcggcgacccgctggtgcacagctcgctgctggcc
gactttgtcagcggcctggttgagggcgccatctatgccggcatctacgccggcgccacc
gcgctgatctcctccgggctcggcgcaccggtcggtttcgccctagtcgccggcgccatg
gtgtccggcattccggagaaaatcggcaccgccgccggcgcgctggtggatacgctgatc
ggcaccggcccgcccgacgcctttatcaccagcggctccgacaacgtccatatgaacggc
aaaccggcggcccgcgccgccggcaccgtcgaccacgattttctcaacagtcccgacgtt
ggcgctgaagaaggcccgggcctgatcgacagcgccctggcggtggccggcggcatcatc
tccagcgtgatgcatcccggcccgctgatcgacaagatcgccagcatcgacggtgaatcg
gtgaaaaactggctcggcgacgtctgggacgacatcacccagcccaccgttgagagcgcc
agcccgtacgccaccccggccaacaaagacaccgtcgcctgcaccaagggccatatggcg
gagaacgtcaacttcctggccgaaggctcgaagaaggtgctgatcaacggccacccagcc
gcacgcaacggcgaccgcagcacctgcgaagccaagatcgaggtggcggacaacccgcgc
gtacgcattggcggcgacggcatcgtggtgcgcgatatccgcagcggtaaaaacgcgctg
gcctactttgccggcggcctgattggcggcctgggcaagcagggcctggcgctcggtcag
tcgctgttccgccgcgtaatgccccgtctggcgctgaaggatgccggctgcgctctggcc
gccgtggccgccgccgatctggcgggcaacgccgccggcgctgccgtgggtacaacgctg
gtggccgccacccagaccggccacccggtgcatatccccaccggcgccaaaatcctcgcc
ggcgaggaggagcttgacttcaccctccccgaccgcatcccgctttactggcagcgcctg
tacaacagccgcaaccgcgccgccggcatgctcggcgtcggctggatgctgccgttcgaa
acccgcctgctgcgcatgctggacgacaacggccagccgcagtttatcctgcgcgacgcc
tccggccgcgagaccggcctcggcaacgtcacccccggcgacgtcattcgctttaccgag
gacggctttaccctctactgctcgctgcagggcgtgatgctgctgcagaccgccgagggc
gaacaccagctgtacgagccggatcctgcccgcgtcggcgaatggcgcatcgcgcgcatt
tatgaccgccacgagaactgccaccacttcgcctggaacagcgccggccagttggtcacc
atctccagcgacaaccaggcgctggacgtcgagctcagctacgacgcgcgcaacggccgt
ctgcttgcggtgcatcagcacgtcggacaggaaaaacgcctgctggtgcagtatgactac
aacccgcaggggcagctgattgcggtgcgcgacgccgacgccatcgtcacccgccgttac
ggctgggacgacgccagcggcctgctggcctggcacagctacgccaccgatctgcgcgtc
agctaccgctggcagcgcgcggcggacggcgaccactggcgcgtcagcgagtatcaggtg
ctggacgcgcagctgcagtgtctggagcactggctgctggaggcggacgaagccgcacgc
cgcgccagcgtcacctgcctgtccggcggcaccaccgaacaccgctgggacagcctgctg
cgcattaccgactataccgacagctacggcgcccgctggcgcttccgctgggccgccctg
cgcgagaacctcagcgccgtcatcacccccgacgaccagcgctgggagctgggctatgac
gagcgcggcaacctgatactggtgcgcgacccgctcggcaacaccacccataccacctgg
caccccgcctgggcgctgccgttaaaagaggtgctgcccgacggcgcctgctggcaatat
cgctacaacccgttcggcgacgtggtggagatgaccgacccgctcggcaacgtcagccgc
tttacctggaacgaccagggcgacctgctgacccgcaccgacccgctcggcaatacccag
cagttctggtggaacgccctcggccagctgacccgcgacgaagactgctccggccaccag
agccgccgcgaatatgacgacgccggcaatctgctccgcacctgcgatgccgaaggcaac
gccacccgctaccgctggagcgccgccggacgtctgcaggcgctggtgcgtcccgacggc
cgggaaacccgctacgactacgaccacgccggtctgccctgccgcgagaacatcgacgcc
ttctccgaacgccgcgtcgagcgcaacgtgcgcggccagataacctgcgccgtcgacccg
gccggcatcgagacacgctatcagtacgaccgcttcggccgtcttaccgcgctggtcaac
cccaacaacgagcgctggcagtttgactacgacgccggccaccgcctgctggcccagagc
gactttgccggccgccgcaggcagtaccgttacaacccgctgggacaggtcagcgccata
accgagtacccgctggcgcaggacggcgacgcggcgcagccgctccacacccgtctgagc
tatgacgcgctgggccgcctgaccgccaaagagaccgccgacagccgcaccgaataccgc
taccaggcgcgcacgctggaggtacggcgtaccccgctggcgctgtggcagcaggcgcag
gcgtgcggcgagcagcccgactggccggagacgctgcgctttagccgcgacgccgccggc
aacctgtgcgccgaagagaaccacagcggactctggcagcacagccatgacccgctcggc
aacctgagcgccacccacatgcccgacggcagcaccctctcccagctgcgctacggcagt
ggccacctactgcagaccgcactgcagaccgccggccagcggctcgatatcgccggctgg
cagcgcgacaagctgcaccgggaagtgacctgcaccctcggcgaagtcacccaggagacc
cgttacgacagcgtcggacgcatcaccctgcgccgcgccagcagcgaacgcagccacccg
ctggtgttcgaacgccgctaccagtgggaccgtcaggacctggtggtgcagcagaagctg
attgagaacgacaacctcaccgacgggccgcagttccagcagcgccgcttcggctatgac
gcccgtgggcagctgacccacagtatcctgccgcagcgcgaggaacgtttttactacgac
cccgccggcaaccgcagcgacggcccggccgtcaccgtctggcgcaacctgctccagcgc
ctgaacggccaccgctggggctatgacggcttcggccggctcagctggcgccgcgacggc
aacaccggcgtcgagcagcgttttcagtacgacgccgagcaccgcctgaccgccgtcacc
ttcgacggcgacagccgctaccagcgcgccgaataccgttacgacgcgctggggcgccgt
acccggaaaaccctctacccgcaccacggcgagccgcagaccaccctgttccactggaac
ggcctgcagatggtcggcgagcacagtcccgaccagccgcagcgcagcatccagtatctg
tacaaggaagacagctacgagccgctggcccgcgtcgaccgccacggcgacagcagcgag
gtgtactggtaccacagcgaactcaacggcctgccggagcgcatgaccgacgcgcagggt
aaagtcgtctggcacggccgtttctccgcctggggcgccaccgacgccgagagcggcacc
ctcgccacggcgcaaaacctgcgctatcagggccagtacctggacagggaaaccgggctt
cactacaatctgttccgctactacgatccgaactgcggtagatttacccagtcagatccg
attgggttggcaggcggggtgaatacctacgcgtataccccggatccgattagctgggtg
gatccgttggggttgagtggatgttcaaccacccttggcaaaaatatgatggcaaagatg
ggattaccccgatctacgtcatggaaaggatatcaagcgcaccacattattcctaaggaa
ctggctaatcaccccgcattaaaaaaaataggctattatattgatgatgctaaaaacggt
atattcttgagaaaaaaagatgaggcgacaagtgcaatggcaaggcaccaagggaatcat
agtggttacactaaatctgtagaaggcgctcttgataaaatcgatttaaatcagtcaaaa
gatattattagtcaacaagtggccgagatccaaaatatagctagaaaaggactacaaaat
ggataccctatacgtcctctcgatatggatgtttccggtggcagccttggcaacgcaaag
gtgaatttattatgggtgaaaatatttaatactggaggttggtga
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integrated database retrieval system
