Serratia sp. MYb239: CLM71_15815
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Entry
CLM71_15815 CDS
T05477
Name
(GenBank) ligand-gated channel protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
serm02000
]
CLM71_15815
Transporters [BR:
serm02000
]
Other transporters
Pores ion channels [TC:
1
]
CLM71_15815
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AVJ18493
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Position
3283537..3285528
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AA seq
663 aa
AA seq
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MEKPSYNKLTAFIIAAFTSQAALAADPESAQDTMVVTASGFQQKIQDSAASISVIPRQQI
ENKAYRDVTDALKDVPGVVVTGGGSSSDISIRGMSSKYTLILIDGKRVDTRGTRPNSDNA
GIEQGWLPPLEAIERIEVVRGPMSSLYGSDAMGGVINIITRKTSTTQGWRGSVHADATFQ
ENRDSGDLYQTNAYASGPLIEGLLGLRVNGLLSHRAEDKIVNGYNEQRMRSGTAVFSLTP
DEQNEFEFEVGRSLQDRNSTPGKSTATESCRKGSCKPSQPSDSLYTRTNYSLTHNGYYDI
GNTTSYIQREETNNPGRNMKMYNTIFNTQNQFALGDHMLNIGGQYRYEKLSDSGNQLESA
QGVNQLTRWSWALFAEDEWAMTNDFSLTSGIRMDRDQNYGSHWTPRLYGVWHLAEQWTLK
GGVSAGYRSPDLRQSSASWGQATGGGSREGMIVGNPDLKPEKSLSEEIALLWDNQQNLNA
GITLFNTDFKDKITEVRRCEDEPGCSLGGTDYDFISDRVNVDKANMRGVEATAGWKIAKD
WQLTANYTYTESEQKSGQFQGQPLNQMPKHMFNTVLDWQAAHDLDVWTRVNFRSKTSEYL
SRTSMAKSTPSYTFVDVGVSYQAAKNLQLTGGVYNILDKTVDYEHYNTTLDGRRYTVGMS
YNF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagccaagctataacaaactcaccgcattcattatcgccgcgttcaccagccag
gccgccctcgccgccgatccggaaagcgcgcaagacaccatggtggtcaccgcttctggt
ttccaacagaagatccaggattccgccgcctccatctcggtgatcccacgtcagcagatc
gaaaataaagcctatcgcgacgtgaccgacgcactgaaagacgtgccgggcgtggtggtc
accggcggcggcagcagcagcgatatcagcatccgcggcatgtcgtccaaatacaccctg
attctgatcgacggcaaacgcgtggatacccgcggcacccgccctaacagcgacaacgcc
gggattgagcagggctggctgccgccgctggaagccatcgaacgcatcgaagtggtgcgc
gggccgatgtcctcgctgtacggctccgacgcgatgggcggcgtgattaacatcatcacc
cgtaaaacctccaccacgcagggctggcgcggctcggtgcacgccgacgccaccttccag
gaaaaccgcgactccggcgacctgtaccagaccaacgcctacgcctccggcccgctgatt
gaaggcctgctcggcctgcgcgtcaacggcctgctgtcccaccgcgccgaagacaaaatc
gtcaacggctataatgaacagcgcatgcgcagcggtaccgctgtcttcagcctgacgccg
gatgagcagaatgagtttgagtttgaagtcggccgctcgctgcaggaccgcaacagcacg
ccgggcaaatccacggcgacggaaagctgccgcaaaggcagctgtaaacccagccagcca
agcgacagcctgtatacccgcaccaactactcgctgacgcacaacggctattacgatatc
ggcaataccaccagctatatccagcgtgaagagaccaacaacccgggccgcaacatgaag
atgtacaacaccatcttcaatacccagaatcagttcgcgctgggtgaccatatgctgaat
atcggcggccagtaccgctatgaaaaactgagcgacagcggcaaccagctggaatctgcg
cagggcgtcaaccagctgacccgttggagctgggcgctgttcgccgaagacgaatgggca
atgaccaatgatttcagcctgaccagcggcatccgtatggaccgcgaccaaaactacggc
agccactggacgccgcgcctgtacggcgtctggcatctggccgagcagtggacgctgaag
ggcggcgtttccgccggctaccgctcgccggatctgcgccagtcgtcagccagctggggc
caggccaccggtggcgggtcgcgcgaaggcatgattgtcggcaacccggacctgaagccg
gaaaagagcctgagcgaagagatcgccctgctgtgggataaccagcaaaatctgaacgcc
gggattaccctgttcaacaccgacttcaaagacaagatcaccgaagtcagacgctgcgag
gatgagccgggctgctctctcggcggcaccgattacgactttatcagcgaccgcgtcaac
gtcgacaaggccaatatgcgcggtgtagaagccaccgccggctggaagatcgccaaagac
tggcagctgaccgccaactatacctataccgaatcggaacagaaaagcggccagttccag
ggccagccgctgaaccagatgccgaaacatatgttcaacaccgtgctggactggcaggcg
gcgcacgatctcgatgtgtggacccgcgtcaacttccgcagtaaaacctcggagtacctg
agccgcacctcgatggccaaaagcacgccgtcctatacctttgtcgacgtcggcgtcagc
tatcaggcggcgaaaaacctgcagctgaccggcggggtgtataacatcctcgataaaacc
gtggattacgagcactacaacaccacgctggacggccgtcgctataccgtagggatgagc
tataacttctga
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