Serratia sp. MYb239: CLM71_16130
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Entry
CLM71_16130 CDS
T05477
Name
(GenBank) sarcosine oxidase subunit alpha
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
serm
Serratia sp. MYb239
Pathway
serm00260
Glycine, serine and threonine metabolism
serm01100
Metabolic pathways
Module
serm_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CLM71_16130
Enzymes [BR:
serm01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
CLM71_16130
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
CLM71_16130
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
HI0933_like
NAD_binding_8
FAD_binding_2
GIDA
FAD_binding_3
Pyr_redox_3
Thi4
DAO
AlaDh_PNT_C
Lycopene_cycl
Fer2_BFD
Motif
Other DBs
NCBI-ProteinID:
AVJ18548
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All DBs
Position
3357385..3360411
Genome browser
AA seq
1008 aa
AA seq
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MKQVNRLADGGRIDRSRPLSFRFNGQTLQGFAGDTLASALLANGVDIVNRSFKYGRPRGI
VAAGAEEPNAVVQLGSTEASQVPNVRATQQALYDGLTAGSTNGWPSTERDLMGAVGKMLG
RFMPPGFYYKTFMKPASMWMTWEKYIRKGAGLGRSPVARDPDRYDHLNQHCDVLIIGAGP
AGLAAALAAGRSGVRVMLADEQEEMGGSLLDSREPLNGRDAAHWVAETLNALAALDNVQL
LPRTTATGRHDHNFVTLLERRTDHLDETAPDHQARLRLHRVRAKRIVLASGAHERPLVYA
GNDIPGNFIAGALSTYIHRYGVAPGQRLVLSTSNDHAYCAALDWLDSGREVAAIVDARDN
PQGELVAQARARGIRIISGSAVIEAQGGSRVNRVRVARIDHAGFRVVDRVDTLECDTVAS
SGGYSPVIHLAVHTGARPVWRDEVPGFVAPQVDGMIAAGAVTGAFATGKVLQDGAAAGAQ
AAAETGGEPVEIALPEVANRNDGAALALYQVPHDRPTSRAPKQFVDLQNDVTAAAIELAI
REGFESIEHIKRYTVMGFGTDQGKLGNINGMAIAARCLGRTIPEVGTTVFRPNYTPVAFG
AVAGRHCAELFEPERHTALHQWHLDRGAEFEEVGQWKRPWYFPQRVNGRSETLEEAVARE
CRAVRSGVGILDASTLGKIDIQGPDARTFLERIYTNKWAKLGFGRVRYGLMCKDDGMVMD
DGTTSCLGANHFLMTTSTGGAAAVLEWLELWHQTEWPELQVFFTSVTDHWATLSLSGPES
RRLLEEVCDIDLSREAFKFMDWRAGTVAGVPARVFRISFTGELAYEVNVQANYARHVWEA
LFEHGEKYGLTPYGTETMHVLRAEKGFIIAGQDTDGSMTPEDLGMQWCVGYDKSFSWVGK
RALTRVDTRRTDRKQLVGLRPKDPKVVLEEGAQIVLDPNHPIPMPMVGHVTSSYYSPTLD
SGFALAVVKDGHQKMGHTVWLPMVDGQVHEAEIVSPIFVDPKGERQNV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaggtgaatcgtctggctgacggcggccgtattgaccgcagccgaccgctgagt
tttcgttttaacggccagaccctgcaggggtttgccggcgataccctggcctcggcgctg
ctggccaacggcgtagatatcgtcaaccgcagctttaagtacgggcgcccgcgcggcatt
gtcgccgccggcgccgaagaacccaatgccgtggtgcaattgggcagcaccgaagccagc
caggtgccgaacgtgcgcgccacccagcaggcgctgtatgacggactgacggcgggcagc
accaacggctggcccagcaccgaacgcgacctgatgggcgccgtgggtaaaatgctcggg
cgttttatgccgcccggcttttactataagacctttatgaagccggcctcgatgtggatg
acctgggagaagtatatccgcaagggcgccggactgggacgcagccccgtggcgcgcgat
ccggatcgctacgatcatcttaaccagcactgcgatgtgctgatcatcggcgccggcccg
gccggtctggctgcggcgctggccgccggccgcagcggcgtacgggtaatgctggcggat
gagcaggaagagatgggcggttcgctgctcgacagccgtgagccgttaaacggccgcgac
gccgcacactgggtggcggaaaccctgaacgcgctggcggcgctggataatgtacagctg
ctgccgcgcaccaccgccaccggccgtcatgaccacaacttcgtcaccctgctggagcga
cgcaccgaccatctggacgaaaccgcgccggaccatcaggcgcgtctgcgcctgcaccgg
gtgcgggccaaacgcattgtgctggccagcggcgcccacgagcggccgctggtctacgcg
ggcaacgatattccgggcaacttcatcgccggcgccctctccacctatattcaccgctac
ggcgtggcgccgggccagcgtctggtgctgtcgaccagcaacgaccacgcctactgcgcc
gcgctggactggctggacagcggccgggaagtggcggcgattgtcgatgccagagataac
ccgcagggcgaactggtggcccaggcgcgcgccagaggcattcgtatcatcagcggcagc
gccgtgattgaggcccagggcggctccagagttaaccgcgtgcgggtcgcccgcatcgac
cacgccggcttccgggtggtggatcgggtggacaccctggagtgcgataccgtagcaagt
tctggcggctacagcccggtgattcacctggccgtgcacaccggcgcgcggccggtctgg
cgcgatgaggtgccgggatttgtcgcgccgcaggtggacggtatgatcgccgccggcgca
gtgaccggcgcgttcgctaccggaaaagtcctgcaagacggcgcggcggcgggtgctcag
gctgccgcagaaaccggcggcgaacccgtggaaattgcgctgcctgaagtggcaaaccgc
aacgacggcgcagcgctggcgctctatcaggtgccgcacgatcggcctacctcgcgggcg
ccgaagcagtttgtcgacctgcaaaatgacgtcaccgccgccgccattgagctggcaata
cgcgaaggctttgagtccatcgaacatatcaagcgctacaccgtgatgggtttcggcacc
gatcagggcaaactgggcaatatcaacggcatggccatcgccgcccgctgtctggggcgc
accatcccggaagtcggcaccaccgtgttccgtcccaactatacgcccgtcgcctttggc
gccgtagcgggacgccactgcgccgaactgttcgagccggagcgccataccgcgctgcat
cagtggcatcttgatcgaggggcggaatttgaagaggtcggccagtggaagcgcccgtgg
tatttcccgcagcgcgtcaacggacgcagcgaaacgctggaagaagccgtggccagggag
tgccgcgccgtacgcagcggcgtggggatcctcgatgcctctaccctcggcaagatcgat
attcaggggccggacgcccgcaccttcctggagcgtatctacaccaacaagtgggcgaag
ctgggctttggccgggtgcgctacggcctgatgtgcaaggacgacggcatggtgatggat
gacggcaccaccagttgcctgggggctaaccacttcctgatgaccaccagcaccggcggc
gcggcggcagtgctggagtggctggagctgtggcaccagaccgaatggccggagctgcag
gtgtttttcacctcggtgaccgaccactgggccactctctccctgtccgggccggaatcc
cgccgcctgctggaagaagtgtgcgatatcgatctgtcgcgcgaagcctttaagtttatg
gactggcgcgccggcacggtggccggcgttccggcgcgggtgttccgcatctcgtttacc
ggcgaactcgcctatgaagttaacgtgcaggccaactacgcgcgccacgtctgggaagcg
ctgttcgagcacggagaaaagtatggcctgacgccttacggcaccgaaacgatgcacgtt
ctgcgcgccgagaaaggctttattatcgccggccaggacaccgacggctccatgacgccg
gaagatctcggcatgcagtggtgcgtaggctatgacaaaagcttttcctgggtgggcaag
cgggcgctgacgcgcgtcgatacccggcgcaccgaccgtaagcagttggtcggcctgcgg
cctaaagatccgaaagtggtgctggaagaaggcgcacagattgtactggatcccaaccat
ccgatcccgatgccgatggtgggccacgtcacctccagctactacagcccgaccctggac
agcggtttcgcgctggcggtggtgaaagacggccaccagaaaatgggccataccgtctgg
ctgccgatggtcgacggccaggtccatgaggccgaaattgtcagcccgatcttcgtcgat
cccaaaggagagcgccaaaatgtctga
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