Serratia sp. MYb239: CLM71_16550
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Entry
CLM71_16550 CDS
T05477
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serm03016
]
CLM71_16550
Enzymes [BR:
serm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CLM71_16550
Transfer RNA biogenesis [BR:
serm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CLM71_16550
Prokaryotic type
CLM71_16550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AVJ18622
LinkDB
All DBs
Position
complement(3450537..3451349)
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AA seq
270 aa
AA seq
DB search
MSEPAVATQKIALGIEYDGSGYYGWQRQQEVPSVQACLEQALSKVADAPITVLCAGRTDA
GVHATGQVVHFETTARRKDAAWTMGVNTHLPPDIAVRWVSPVAEDFHARFSATARRYRYV
IFNHRYRPAVLQQGVTHFYHPLDAERMQRAAQALLGENDFTSFRAVQCQSRTPWRNVKHV
KVTRHGQYIVVDIKANAFVHHMVRNIVGSLMEIGCGNQDENWMAELLALKDRNLAAATAR
AEGLYLVSVDYPERFALPQPPMGPLFLADD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaccggctgtagcgacccagaaaatcgcgctgggcattgaatatgacggcagc
ggctattacggctggcagcgtcagcaagaggtgccgagcgtgcaggcctgcctggaacag
gcgctgagtaaagtggcggacgcgccgatcacggtgctctgcgccggccgcaccgacgcc
ggggtgcacgccaccggccaggtggtgcattttgaaaccacggcgcgccgtaaggatgcc
gcctggacgatgggggtcaatacccatctgccgccggatatcgccgtgcgctgggtcagc
ccggtggcggaggatttccatgcgcgtttcagcgccaccgcccgccgttatcgctatgtg
atcttcaaccaccgctatcgtccggcggtgctgcagcagggggtgacgcatttctatcac
ccgctggacgccgagcgcatgcagcgcgcagcgcaggcgctgctgggagagaacgacttt
acctcattccgcgccgtgcagtgtcagtcgcgcacgccgtggcggaatgtaaaacacgtt
aaggtcacgcgtcacgggcagtatatcgtggtagatataaaggcgaatgcctttgtgcat
catatggtgcgcaacatcgtcggtagcctgatggagattggctgcggcaaccaggatgaa
aactggatggcggagctgctggcgttaaaagaccgtaatctggcggcggccaccgccaga
gcggaaggtctgtacctggtttccgtggattatcctgagcgtttcgcgctgccgcaaccg
ccgatggggccgctgtttttagccgatgactaa
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