Serratia sp. MYb239: CLM71_17435
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Entry
CLM71_17435 CDS
T05477
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLM71_17435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
serm03000
]
CLM71_17435
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_17435
Enzymes [BR:
serm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
CLM71_17435
Transcription factors [BR:
serm03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CLM71_17435
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLM71_17435
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AVJ20149
LinkDB
All DBs
Position
complement(3636581..3638059)
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AA seq
492 aa
AA seq
DB search
MMKKPTPSVAMSEHQALYAALRARDRKFDGRFFVGVSSTGIYCRPVCSARTPKSENCSFY
PSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEHSCEALAARLG
ISDRHLRRIFAEQFGASPIDYAQSHRLLQAKRLLADTDMPLSEVAFAAGFGSLRRFNELF
KQRYRLSPSALRESSGRQTRAADSGLVFHLGYRPPYDWPRMLNFLQARAVSSVECVQDGR
YYRSIAVTLGGESYQGWVSVQPETARDRVRVEIAPSLSRVTTDVLRRVRQLFDLDAAPDV
IAAALGPLVTDPGLRLPGCVNGFEQATRAVLGQLVSVKMAAVFAGRMAERWGTPLAQPHA
GITHVFPLAGQIAALQPEMLRPLGIQLKRAAALIALARALEEGRLALDNVLDIEQGIKAL
TALPGIGDWTASYIAMRAWSWPDVFLSGDYLIKQRFPGMTPRQIERYAERWRPWRSYATL
HLWHHDGWQPER
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaaaccgacaccgagcgttgccatgagtgaacaccaggcgttatatgccgcg
ctgcgcgcgcgggatcgcaaatttgacggccgtttctttgtcggcgtgtcgtcgaccggc
atctactgccggccggtgtgcagcgcccgcacgccgaaaagcgagaactgcagcttctac
cccagcgccgccgccgctgaactggcgggctttcgcccctgcctgaagtgccggccggaa
ctggcaccgggcctggcgctgatcgacctgggcaaccgctatgcgcaggttgcggtgcag
ctgattgagcagggctacctgtctgaacacagctgtgaggcgctggcggcgcggctgggg
atttccgatcgccatctgcggcgcatcttcgccgagcagttcggcgcttcgcccatcgat
tatgcgcagtcgcaccggctgctgcaggccaagcgcctgctggcggataccgatatgccg
ctcagcgaggtggcgttcgccgcggggtttggcagcctgcggcgctttaatgaactgttt
aaacagcgctaccgcctgagtccgtcggcgctgcgtgaaagcagcggccggcagacacgc
gccgccgacagcgggctggtgtttcatctgggctatcgcccgccgtacgactggccgcgc
atgctgaattttttacaggcgcgtgcggtcagcagcgtggagtgcgtgcaggacgggcgt
tattaccgctccatcgcggtgacgctcggcggagagtcgtatcagggctgggtcagcgtg
cagccggaaacggcgcgcgatcgggtgcgggtggagattgcgccgtcgctgagccgggtg
acgaccgacgtgctgcggcgcgtgcgccagctgttcgatctggatgcggcgccggacgtc
atcgccgccgcgctggggccgctggtgaccgaccccggcctgcgcctgcccggctgtgtc
aatggcttcgaacaggcgacgcgcgcggtgctggggcaactggtcagcgtgaagatggcc
gccgtgtttgccggacggatggcggagcgttggggaacaccgctggcgcagccgcacgcc
ggcattactcatgtgtttccgctggccgggcagatagccgcgctgcagccggagatgctg
cggccgctcggtattcagctcaaacgcgcagcagcgttgatcgcgctggcgcgtgcgctg
gaagaggggcggctggcgctggataacgtgctggatattgagcagggcatcaaggcgctg
accgcgctgccgggcatcggcgactggacggcgagctatattgcgatgcgcgcctggtca
tggccggacgtatttctgagcggcgattatctgattaaacagcgctttcccggcatgacg
ccgcgccagattgagcgctatgccgaacgttggcggccgtggcgctcttacgccactttg
catctgtggcatcacgacggctggcagcctgagcgatag
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