Serratia sp. MYb239: CLM71_17780
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Entry
CLM71_17780 CDS
T05477
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
serm
Serratia sp. MYb239
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serm03009
]
CLM71_17780 (der)
Ribosome biogenesis [BR:
serm03009
]
Prokaryotic type
GTPases
CLM71_17780 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
cobW
AAA_22
Roc
Ras
ABC_tran
AAA_24
SRPRB
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
AVJ18845
LinkDB
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Position
complement(3717830..3719320)
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AA seq
496 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGNEFIIIDTGGI
DGTEDGVETHMAGQSLLAIEEADIVLFMVDARAGLMPADQGIAQHLRSRQKATFLVANKT
DGIDPDMASADFYALGLGDVHPIAASHGRGVTQLIEHVLVPFVPEKEQEVELTEAEANAA
YWAEQNGELEEEGIPADEEDDFNPQDLPIKLAIVGRPNVGKSTLTNRILGEERVVVYDMP
GTTRDSIYIPMVRDEREYVLIDTAGVRKRGKVTETVEKFSVIKTLQAIEDANVVLLVIDA
REGISDQDLSLLGFILNSGRSLVIAVNKWDGMSEEDRDHVKEMLDLRLGFVDFARVHFIS
ALHGSGVGNLFESVQEAYECATRRVNTSLLTKIMNMAADDHQPPLVRGRRVKLKYAHAGG
YNPPIVVIHGNQVTDLSDSYKRYLMNYFRRSLKVMGTPIRIQFKEGENPFAGKRNTLTPT
QMRKRKRLMSHLKKGK
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatacctgtcgtcgcgctggtcgggcgcccgaatgtgggtaaatccaccttgtttaac
cgtttgacacgtacgcgcgatgcgctggtggcggatttccccgggctcacgcgtgaccgc
aagtatggtcgtgccgaagtagagggcaacgaatttatcatcatcgataccggcggcatc
gacggtaccgaggatggcgtcgaaacccatatggccggccagtcgctgctggcgattgaa
gaagccgatatcgtgctgtttatggtcgatgcgcgcgccgggctgatgcctgccgatcag
ggcattgcccagcatctgcgcagccgtcagaaggcgacctttctggtggccaacaaaact
gacggtatcgacccggatatggccagcgccgatttctacgcgctggggctgggtgatgtg
catcctatcgccgcctctcacggccgtggcgtgacgcagctgattgaacacgtgctggtg
ccgtttgtgccggaaaaagagcaggaagtcgagctcaccgaagcagaggccaacgccgct
tactgggcggagcagaacggcgagctggaagaagagggcatcccggcggatgaggaagat
gacttcaacccgcaggatctgccgatcaaactggcgattgtcggccggccgaacgttggc
aaatccacgctgaccaaccgcatcctcggcgaagagcgcgtggtggtgtacgacatgccg
ggcaccacccgcgacagcatctacattccgatggtgcgcgatgagcgggaatatgtgctg
atcgataccgccggcgtgcgtaagcgcggcaaagtaacggaaaccgtagagaaattctcg
gtgatcaaaacgctgcaggcgatcgaagacgccaacgtggtgctgctggtgatcgatgcg
cgcgaaggcatctccgatcaggatctgtcgctgctcggctttatcctcaacagcgggcgc
tcgctggtgattgcggtcaacaagtgggacggcatgagcgaggaagaccgcgatcacgtc
aaagagatgctcgacctgcgtctgggcttcgttgattttgcccgcgtgcactttatttcc
gcactgcacggcagcggcgtcggcaacctgttcgagtcggtgcaggaagcctacgaatgc
gccacgcgccgtgttaacacctcgctgctgaccaagatcatgaacatggcggcggacgac
caccagccgcctttggtgcgcgggcgtcgcgtgaagctgaagtacgcccacgccggtggt
tacaacccgccgatcgtggtgatccacggcaaccaggtgaccgacctgtcggattcctac
aagcgttatctgatgaactacttccgccgttcgctgaaggtgatggggacgccgatccgt
atccaattcaaagagggtgagaacccgtttgccggcaagcgcaatacgctgacgccgacc
cagatgcgtaagcgcaaacgcttgatgagccatctgaagaaaggcaaataa
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