Serratia sp. MYb239: CLM71_18080
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Entry
CLM71_18080 CDS
T05477
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CLM71_18080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_18080
Enzymes [BR:
serm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CLM71_18080
DNA repair and recombination proteins [BR:
serm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CLM71_18080
Prokaryotic type
CLM71_18080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AVJ18904
LinkDB
All DBs
Position
3782541..3783224
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AA seq
227 aa
AA seq
DB search
MSTPLTWHDVIGKEKEQPYFVDTLAFVANERQAGKTIYPPQKDVFNAFRFTELADVKVVI
LGQDPYHGPNQAHGLSFSVLPGVPAPPSLVNMYKELATDIPGFERPDHGCLQSWAEQGVL
LLNTVLTVERGNAHSHANLGWETFTDKVIAALNENREGVVFLLWGSHAQKKGSFIDRQRH
HVLKAPHPSPLSAHRGFFGCRHFSQANQLLEQQGLTPIDWMPHLPQQ
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcccctcacctggcatgacgttattggcaaggagaaagagcaaccctatttt
gtcgacacgctcgcctttgttgccaatgagcgtcaggccggcaaaaccatttacccgccg
cagaaagacgtgtttaacgcttttcgctttaccgaactggccgacgtcaaggtggtgatc
ctcggtcaggatccctaccacggcccgaatcaggcgcatggcctttcattttccgtgctt
cccggcgtgccggcgccgccgtcgctggtgaatatgtataaagaactggcaacggatatt
ccgggcttcgagcgccccgatcacggttgcctgcaaagctgggcggaacagggcgtactg
ctgctcaacaccgtattgacggtggagagaggaaacgcgcactcgcatgccaacctgggc
tgggaaacctttaccgataaggtcatcgccgcgctgaatgaaaaccgcgaaggcgtggta
ttcctgctgtggggctcacacgcgcagaagaaaggcagttttatcgaccgtcagcgtcat
cacgtgctgaaagcgccgcatccgtcgccgctttcagcccaccgcggcttctttggctgc
cggcacttctcgcaagccaaccaactgctggaacagcaggggctaacgccgatcgactgg
atgccgcatttaccgcagcaataa
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