Serratia sp. MYb239: CLM71_18675
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Entry
CLM71_18675 CDS
T05477
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
serm
Serratia sp. MYb239
Pathway
serm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLM71_18675 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serm03400
]
CLM71_18675 (recC)
Enzymes [BR:
serm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CLM71_18675 (recC)
DNA repair and recombination proteins [BR:
serm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLM71_18675 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
AVJ19008
LinkDB
All DBs
Position
complement(3911078..3914449)
Genome browser
AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDVLKTLTSVLIAREPLADPFQQEVVLVQSPGMAQWLQMQLAEQFGIAANI
EFPLPATFIWDMFTRVLPGIPKESAFSKDAMTWKLMWLLPDMLTQPEFAPLQHYLTDDGD
KRKIHQLAGRVADLFDQYLVYRPQWLESWQRGELIADLPEAQQWQAPLWARLVQYTQELG
QPEWHRANLYRRFIATLEQAEQCPSGLPARVFICGISALPPVYLEALQALGRHIDIHLMF
TNPCRYYWGDIQDYAFLARLQSRKRRRHHQAQEQGLFRDPEQAAQLFDAEGEQLLSNPLL
ASWGKLGRDHLYLLAQMETLQEVDAFVDIPADNMLHGIQRDMLELEDCAVIGTTPETFER
SDAKRLLDPDDRSLSLHACHSPQREVEVLHDQLLAMLAEDPQLTARDIIVMVADIDSYTP
YIQAVFGNAPADRYLPFAISDRKARQAHPALQAFISLLDLPQSRFTSEQVLLLLEVPALA
ARFAIQEEGLRLLRHWVAESGVRWGLDDDNVRELALPTTGQHTWRFGITRMLLGYAMDSN
AGDWQGVLPYDESSGLAAELAGQLAELLTQLGLWRQRLSETRTLAEWAPLCRQLLESFFA
ADGDTEAALALIEKQWHQVLEHGANAQYPDAVPLSLLRDELAARLDQERISQRFLAGQIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAQQVKRGDRSRRDDDRYLFLEAI
LSAQEKLYISFIGRSIQDNSERYPSVLVTELLEYLQQSYRLPGDEERDVDASASRVSEHL
LRWHARMPFAAENFLPDSEAQSYAAEWLPAADGRGQAHPEFNQPLPPEPKTQIALDELQR
FYRHPIRAFFQQRLGVSFVLEETELPDEEPFTLDNLSRYQYNNQLLNALIDGDDAAKLYQ
RIRASGGLPYGAFGEIYWQKQQEEMQDLAAQVREERKTSGSLELDIDVAGVHIGGWLHQV
QEDGLLRWRPAALSAVDGILLWLEHLLYCCAGGQGESRMLGRKNSVWRFAALPAEAAQEQ
LAELVAGYQRGLCQPLMLLNKSGWAWLSQCYQPENQAIDWNEETQSKARGKLLQAWQGDQ
RIPGEGEDPYVQRVLRQLDNDALAQILAETERYLLPVARHNLG
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtttacggtttatcattccaatcagctggacgtgctgaaaacgctaaccagcgtattg
atcgccagagaaccgttggccgaccctttccagcaggaggttgtgctggtgcaaagcccg
ggaatggcgcagtggctgcagatgcaactggccgagcagttcggcattgccgccaatatt
gagtttccgctgccggcgacctttatctgggacatgtttacccgcgtgttgccgggcatc
ccgaaagagagcgccttcagtaaggacgctatgacctggaaactgatgtggctgctgccc
gatatgctgacacagcccgagtttgccccgttgcagcactatctgaccgacgacggcgat
aagcgcaaaattcaccagcttgccgggcgcgttgccgatctgtttgaccaatatctggtg
taccggccgcagtggctggaaagttggcaacgtggcgaattgatcgccgatctgcctgag
gcgcagcagtggcaggcgccgctgtgggcgcggctggtgcagtatacccaggaactgggg
cagccggagtggcaccgtgccaacctgtatcgccgctttatcgccacccttgagcaggcg
gaacagtgcccgtcagggttaccagcgcgggtgtttatctgcggtatttcggcgctgccg
ccggtctaccttgaagcgctgcaggcgctgggcaggcatattgatattcatctgatgttc
accaacccgtgccgctattactggggcgatatccaggattatgcgtttctggcgcggctg
caaagccgtaagcgacgccgccaccaccaggcacaggaacaggggttattccgcgatccc
gagcaggcggcgcagctgttcgacgctgaaggtgagcagctgctgagtaacccgctgctg
gcgtcatggggtaagctggggcgcgatcatctgtatctgctggcgcagatggaaacgctg
caggaggttgacgcttttgtcgatatcccggcggacaacatgctgcacggcatacagcgc
gacatgctggagctggaggattgcgcggtgatcggcaccacgccggaaacttttgaacgc
agcgatgccaagcgcctgctggaccccgacgatcgttcactcagtctgcacgcctgccat
agcccgcagcgcgaagttgaagtgctgcacgaccaactgctggcgatgctggcagaagac
ccgcagcttaccgcacgcgatatcattgtgatggtcgccgatattgacagttatacgcca
tacattcaggcggtgttcggcaacgcgccggcggatcgctacctgccgtttgccatttcc
gaccgtaaagcgcgccaggctcatccggcgttgcaggcgtttatctcattgctggatttg
ccgcagagccgctttacctctgaacaggtgctgctgctactggaggtaccggcgctggcc
gcacgctttgccattcaggaggaggggctgcgcctgttacgccattgggtggctgaatcc
ggcgtacgctgggggctggatgatgacaacgtgcgcgagctggcgctgccgaccaccggc
cagcacacctggcgcttcggcattacccgcatgctgttgggctatgccatggacagcaac
gccggcgactggcagggggtgttgccatacgatgaatccagcgggctggcggcggagctg
gcgggtcagttggctgaactgctaacgcagctaggcctgtggcgccaacgtctcagcgaa
acgcgcaccctggcggagtgggcgccgctgtgccgccagctgctggagagcttttttgcc
gccgatggcgacacggaagccgcgctggcgctgatagaaaagcagtggcatcaggtactg
gagcatggtgccaatgctcaatatcccgatgcggtaccgctgagtctgttgcgtgacgag
ctggcggcgcgtctcgatcaggagcggatcagccagcgttttttggccgggcagatcaat
ttctgcacgctgatgccgatgcgttccatcccgttcaaggtggtgtgcctgcttggcatg
aacgacggcgtttacccgcgcaccctgccgccgctgggctttgacctgatggcgcagcag
gtgaagcgcggcgaccgcagccgccgcgacgacgaccgttatctgttcctggaagctatt
ttgtccgcgcaggaaaagctatatatcagctttatcgggcgttcgattcaagacaacagc
gaacgttatccctcggtgttggtgacggagttactggagtacctgcagcagagttaccgt
ctgccgggagatgaggaacgggatgtcgacgccagcgcgagccgggttagcgaacattta
cttcgctggcatgcccgtatgccgtttgcggcagagaatttcttgccggacagcgaggcg
caaagctacgccgccgaatggctgccggccgccgacggacgcggccaggcgcaccccgag
ttcaaccagccgctgccgcccgaacccaaaacacagatcgcgctggatgagctgcagcgt
ttttatcgccacccgatccgcgcattcttccagcagcgtctgggcgttagctttgttctg
gaagaaaccgaactgccggacgaagagccgtttacgctggataatctcagccgctatcag
tacaacaaccaactgctgaacgcgctgattgacggcgacgatgcggcaaaattgtatcag
cgcatcagggcctccggcggtttgccttacggcgccttcggcgagatttactggcagaag
caacaggaagagatgcaggatttggcggcgcaggtgcgtgaggagcgcaagacaagcggc
agtctggaattggatatcgacgtggcgggcgtgcatatcggcggctggctgcatcaggtg
caggaagatggcctgctgcgctggcggccggccgctctgtcggcggtggacggcattctg
ctgtggctggaacatttgctgtattgctgtgcgggcggtcagggggaaagccgcatgctg
gggcgcaagaactcagtctggcgttttgccgcgctgccggcggaagccgcgcaagagcaa
ttggcggagctggtggccggctatcagcgcggcctgtgccagccgctgatgctgcttaat
aagagcggttgggcctggttaagccagtgttatcagccggaaaatcaggcgattgactgg
aacgaagagacgcagagtaaagcgcgcggtaagctgctgcaggcctggcagggcgaccag
cgaattcctggcgaaggggaagacccttatgtacagcgggtgctgcgtcagctggataat
gatgccctggcgcaaattttagcggaaacagaacgttacctgctgccggttgccagacat
aatctgggatag
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